Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 HTR7P1-201ENST00000538670 1336 ntBASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 AL359736.2-201ENST00000621992 437 ntBASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CPNE9Q8IYJ1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CPNE9Q8IYJ1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 FP475955.4-201ENST00000623131 1990 ntBASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 FAM197Y4-202ENST00000622692 608 ntBASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 AC093503.3-201ENST00000624917 2352 ntBASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE9Q8IYJ1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 PRORSD1P-201ENST00000295112 541 ntBASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 NIFKP9-201ENST00000419265 221 ntBASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms