Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 AC026185.1-201ENST00000445748 174 ntBASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM42Q8IWZ5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TRIM42Q8IWZ5 AC018470.1-201ENST00000624790 3129 ntBASIC19.02■□□□□ 0.63
TRIM42Q8IWZ5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
TRIM42Q8IWZ5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 AC104417.2-201ENST00000562989 1793 ntBASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 AL355472.2-201ENST00000422958 438 ntBASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 RAP2CP1-201ENST00000605103 478 ntBASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM42Q8IWZ5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 DUX4L16-201ENST00000555130 1264 ntBASIC19■□□□□ 0.63
TRIM42Q8IWZ5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 UBQLN4P1-201ENST00000461599 1801 ntBASIC19■□□□□ 0.63
TRIM42Q8IWZ5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19■□□□□ 0.63
TRIM42Q8IWZ5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM42Q8IWZ5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRIM42Q8IWZ5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM42Q8IWZ5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM42Q8IWZ5 SDHAP1-207ENST00000440850 2000 ntBASIC18.98■□□□□ 0.63
TRIM42Q8IWZ5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM42Q8IWZ5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRIM42Q8IWZ5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
TRIM42Q8IWZ5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms