Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 AC093525.10-201ENST00000625130 1569 ntBASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDKL3Q8IVW4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL3Q8IVW4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 KRT8P41-201ENST00000533985 1514 ntBASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CDKL3Q8IVW4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 CD99P1-205ENST00000527459 561 ntBASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL3Q8IVW4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 AC138932.1-201ENST00000534164 6830 ntBASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 RNF165-205ENST00000588679 2904 ntBASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms