Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 AC243732.1-201ENST00000612648 864 ntBASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 EDA-201ENST00000338901 1233 ntBASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 MIR939-201ENST00000401314 82 ntBASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.75■□□□□ 0.27
LYSMD2Q8IV50 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 RBM17P2-201ENST00000616397 1405 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 AC008894.3-201ENST00000624324 3103 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 IRS3P-201ENST00000223076 1006 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 DUX4L2-201ENST00000561772 1275 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 AC106739.1-201ENST00000617035 715 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 DUX4L6-201ENST00000626483 1275 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 DUX4L1-201ENST00000627662 1275 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 DUX4L8-201ENST00000629013 1275 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 DUX4L3-201ENST00000630187 1275 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 DUX4L7-201ENST00000630678 1275 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 DUX4L5-201ENST00000630834 1275 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 IRX1P1-201ENST00000438849 1838 ntBASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms