Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
COPS6Q7L5N1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
COPS6Q7L5N1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 AL158211.5-201ENST00000623583 2518 ntBASIC24.11■■□□□ 1.45
COPS6Q7L5N1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 GCSHP2-201ENST00000560971 527 ntBASIC24.11■■□□□ 1.45
COPS6Q7L5N1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 NEK4P2-201ENST00000580004 1012 ntBASIC24.11■■□□□ 1.45
COPS6Q7L5N1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 TEX21P-204ENST00000641479 1693 ntBASIC24.11■■□□□ 1.45
COPS6Q7L5N1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COPS6Q7L5N1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 BID-204ENST00000399767 2129 ntTSL 2 BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COPS6Q7L5N1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COPS6Q7L5N1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COPS6Q7L5N1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COPS6Q7L5N1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COPS6Q7L5N1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COPS6Q7L5N1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COPS6Q7L5N1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
COPS6Q7L5N1 AL023284.2-201ENST00000405850 579 ntBASIC24.08■■□□□ 1.45
COPS6Q7L5N1 FAM86EP-206ENST00000510506 987 ntBASIC24.08■■□□□ 1.45
COPS6Q7L5N1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COPS6Q7L5N1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COPS6Q7L5N1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.08■■□□□ 1.45
COPS6Q7L5N1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC24.08■■□□□ 1.45
COPS6Q7L5N1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.08■■□□□ 1.45
COPS6Q7L5N1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
COPS6Q7L5N1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COPS6Q7L5N1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COPS6Q7L5N1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COPS6Q7L5N1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
COPS6Q7L5N1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COPS6Q7L5N1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.06■■□□□ 1.44
COPS6Q7L5N1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COPS6Q7L5N1 AP000523.1-201ENST00000398242 1049 ntBASIC24.06■■□□□ 1.44
COPS6Q7L5N1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.06■■□□□ 1.44
COPS6Q7L5N1 AL671277.2-201ENST00000458060 996 ntBASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms