Protein–RNA interactions for Protein: Q76G19

PDZD4, PDZ domain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4Q76G19 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZD4Q76G19 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PDZD4Q76G19 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.25■□□□□ 0.83
PDZD4Q76G19 AC007663.1-201ENST00000438948 1240 ntBASIC20.25■□□□□ 0.83
PDZD4Q76G19 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.25■□□□□ 0.83
PDZD4Q76G19 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PDZD4Q76G19 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.25■□□□□ 0.83
PDZD4Q76G19 AC022616.7-201ENST00000525383 220 ntBASIC20.25■□□□□ 0.83
PDZD4Q76G19 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.25■□□□□ 0.83
PDZD4Q76G19 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
PDZD4Q76G19 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZD4Q76G19 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZD4Q76G19 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZD4Q76G19 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZD4Q76G19 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PDZD4Q76G19 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZD4Q76G19 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 TREX1-205ENST00000625293 1783 ntBASIC20.24■□□□□ 0.83
PDZD4Q76G19 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZD4Q76G19 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZD4Q76G19 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 AC117947.1-201ENST00000427448 529 ntBASIC20.24■□□□□ 0.83
PDZD4Q76G19 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 TSPY17P-201ENST00000450329 467 ntBASIC20.24■□□□□ 0.83
PDZD4Q76G19 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZD4Q76G19 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZD4Q76G19 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZD4Q76G19 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZD4Q76G19 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZD4Q76G19 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZD4Q76G19 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PDZD4Q76G19 LINC01465-201ENST00000408887 1940 ntBASIC20.23■□□□□ 0.83
PDZD4Q76G19 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.23■□□□□ 0.83
PDZD4Q76G19 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PDZD4Q76G19 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PDZD4Q76G19 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZD4Q76G19 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PDZD4Q76G19 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.23■□□□□ 0.83
PDZD4Q76G19 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 AC092338.2-201ENST00000568827 1415 ntBASIC20.23■□□□□ 0.83
PDZD4Q76G19 AL138966.2-201ENST00000621997 464 ntBASIC20.23■□□□□ 0.83
PDZD4Q76G19 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.23■□□□□ 0.83
PDZD4Q76G19 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PDZD4Q76G19 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZD4Q76G19 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZD4Q76G19 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZD4Q76G19 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZD4Q76G19 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZD4Q76G19 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZD4Q76G19 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZD4Q76G19 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZD4Q76G19 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZD4Q76G19 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZD4Q76G19 AC063952.2-201ENST00000498792 1227 ntBASIC20.22■□□□□ 0.83
PDZD4Q76G19 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 AC139887.4-201ENST00000607877 719 ntBASIC20.22■□□□□ 0.83
PDZD4Q76G19 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZD4Q76G19 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZD4Q76G19 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.22■□□□□ 0.83
PDZD4Q76G19 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDZD4Q76G19 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms