Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00575Q6W349 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00575Q6W349 MAG-206ENST00000597035 542 ntTSL 4 BASIC12.1□□□□□ -0.47
LINC00575Q6W349 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC12.1□□□□□ -0.47
LINC00575Q6W349 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00575Q6W349 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00575Q6W349 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 ESPNP-201ENST00000270691 2015 ntBASIC12.1□□□□□ -0.47
LINC00575Q6W349 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 AC073592.3-201ENST00000625118 1834 ntBASIC12.09□□□□□ -0.47
LINC00575Q6W349 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LINC00575Q6W349 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00575Q6W349 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LINC00575Q6W349 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LINC00575Q6W349 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LINC00575Q6W349 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 GAS2L1P2-201ENST00000436355 1356 ntBASIC12.08□□□□□ -0.48
LINC00575Q6W349 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 AP001330.3-201ENST00000520123 633 ntBASIC12.08□□□□□ -0.48
LINC00575Q6W349 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00575Q6W349 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
LINC00575Q6W349 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms