Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 SDHAP1-207ENST00000440850 2000 ntBASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 TSPY22P-201ENST00000427496 604 ntBASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 MIR3917-201ENST00000580971 93 ntBASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 AL391807.1-203ENST00000604392 2365 ntBASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR3Q6P9H4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 TSPY19P-201ENST00000418461 509 ntBASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 AP000347.1-202ENST00000435868 847 ntBASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 TSPY18P-201ENST00000441642 509 ntBASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNKSR3Q6P9H4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNKSR3Q6P9H4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNKSR3Q6P9H4 KRT8P3-201ENST00000519669 1449 ntBASIC20.52■□□□□ 0.87
CNKSR3Q6P9H4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNKSR3Q6P9H4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
CNKSR3Q6P9H4 AL391422.3-201ENST00000603791 2761 ntBASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 DRAXINP1-201ENST00000437611 948 ntBASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 TPSP2-201ENST00000561760 610 ntBASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR3Q6P9H4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 EMBP1-201ENST00000458200 901 ntBASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 AL732292.2-201ENST00000609649 430 ntBASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 AL121772.3-201ENST00000610840 674 ntBASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR3Q6P9H4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNKSR3Q6P9H4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms