Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.81■□□□□ 0.44
HLA-DQA1Q5Y7H0 B3GAT3P1-201ENST00000471720 806 ntBASIC17.81■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.81■□□□□ 0.44
HLA-DQA1Q5Y7H0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.81■□□□□ 0.44
HLA-DQA1Q5Y7H0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQA1Q5Y7H0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQA1Q5Y7H0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQA1Q5Y7H0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQA1Q5Y7H0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DQA1Q5Y7H0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC093484.2-201ENST00000580996 2166 ntBASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 AL596275.1-201ENST00000423464 877 ntBASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 FAM207BP-201ENST00000447172 505 ntBASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC116562.2-201ENST00000507042 360 ntBASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DQA1Q5Y7H0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC011506.1-201ENST00000474329 610 ntBASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 REXO1L10P-201ENST00000615707 1290 ntBASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 REXO1L12P-201ENST00000622156 912 ntBASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC007952.6-201ENST00000573168 2673 ntBASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC003957.1-201ENST00000625108 2673 ntBASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQA1Q5Y7H0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 UNC93B2-201ENST00000285383 730 ntBASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 TSPY21P-201ENST00000433481 731 ntBASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC091390.4-202ENST00000476426 537 ntBASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 AC130371.2-201ENST00000619443 611 ntBASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQA1Q5Y7H0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DQA1Q5Y7H0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms