Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 AP002414.1-201ENST00000391405 1147 ntBASIC10.45□□□□□ -0.74
UBR4Q5T4S7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 MRPL20P1-201ENST00000400819 433 ntBASIC10.45□□□□□ -0.74
UBR4Q5T4S7 AC007967.2-201ENST00000432613 625 ntBASIC10.45□□□□□ -0.74
UBR4Q5T4S7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 AL162377.1-201ENST00000618844 1793 ntBASIC10.44□□□□□ -0.74
UBR4Q5T4S7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 TREX1-205ENST00000625293 1783 ntBASIC10.44□□□□□ -0.74
UBR4Q5T4S7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 UNC93B6-202ENST00000528242 690 ntBASIC10.44□□□□□ -0.74
UBR4Q5T4S7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 AC093520.2-201ENST00000561830 333 ntBASIC10.44□□□□□ -0.74
UBR4Q5T4S7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 MINOS1P3-201ENST00000457048 203 ntBASIC10.44□□□□□ -0.74
UBR4Q5T4S7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC10.44□□□□□ -0.74
UBR4Q5T4S7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AL031432.2-201ENST00000566714 459 ntBASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AL928711.1-201ENST00000570165 459 ntBASIC10.43□□□□□ -0.74
UBR4Q5T4S7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AC036111.1-201ENST00000533973 1582 ntBASIC10.43□□□□□ -0.74
UBR4Q5T4S7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AC254562.1-201ENST00000417586 456 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms