Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 AC026471.1-201ENST00000564629 3026 ntBASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 AC098818.2-201ENST00000564925 2320 ntBASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 AP000692.2-201ENST00000608391 879 ntBASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDLRAP1Q5SW96 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 RBM17P1-201ENST00000453646 1190 ntBASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 AL355075.4-201ENST00000554988 638 ntBASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LDLRAP1Q5SW96 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 AC008040.2-201ENST00000461049 708 ntBASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 PRSS44-201ENST00000515154 1146 ntBASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDLRAP1Q5SW96 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 AL032819.2-201ENST00000624543 2162 ntBASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms