Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 HLA-B-256ENST00000639848 1089 ntBASIC18.32■□□□□ 0.52
PDCD4Q53EL6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 AC092368.3-202ENST00000574180 1591 ntBASIC18.32■□□□□ 0.52
PDCD4Q53EL6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.32■□□□□ 0.52
PDCD4Q53EL6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PDCD4Q53EL6 BICD1-207ENST00000551848 1962 ntBASIC18.31■□□□□ 0.52
PDCD4Q53EL6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD4Q53EL6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 ANO7L1-203ENST00000602586 1720 ntBASIC18.3■□□□□ 0.52
PDCD4Q53EL6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.3■□□□□ 0.52
PDCD4Q53EL6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 AL121829.2-201ENST00000620908 328 ntBASIC18.3■□□□□ 0.52
PDCD4Q53EL6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.3■□□□□ 0.52
PDCD4Q53EL6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 AC083906.2-201ENST00000511578 360 ntBASIC18.29■□□□□ 0.52
PDCD4Q53EL6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 IKBKGP1-201ENST00000612193 1073 ntBASIC18.29■□□□□ 0.52
PDCD4Q53EL6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms