Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DCAF4L1Q3SXM0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DCAF4L1Q3SXM0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DCAF4L1Q3SXM0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
DCAF4L1Q3SXM0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DCAF4L1Q3SXM0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.66■□□□□ 0.9
DCAF4L1Q3SXM0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.66■□□□□ 0.9
DCAF4L1Q3SXM0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 AL049597.2-201ENST00000565575 961 ntBASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.65■□□□□ 0.9
DCAF4L1Q3SXM0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
DCAF4L1Q3SXM0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 AC006011.2-201ENST00000621313 1158 ntBASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 AC141257.4-201ENST00000634557 245 ntBASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 AC136944.6-201ENST00000634818 245 ntBASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.64■□□□□ 0.89
DCAF4L1Q3SXM0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 KRT8P3-201ENST00000519669 1449 ntBASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 AC104076.2-201ENST00000448912 469 ntBASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 MIR4674-201ENST00000582457 87 ntBASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
DCAF4L1Q3SXM0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 KRT8P45-201ENST00000414328 1447 ntBASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 DUX4L26-201ENST00000489078 1255 ntBASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 AC141586.3-201ENST00000562166 1838 ntBASIC20.62■□□□□ 0.89
DCAF4L1Q3SXM0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
DCAF4L1Q3SXM0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DCAF4L1Q3SXM0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.61■□□□□ 0.89
DCAF4L1Q3SXM0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
DCAF4L1Q3SXM0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DCAF4L1Q3SXM0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms