Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 BTBD19-209ENST00000495433 934 ntTSL 319.55■□□□□ 0.725e-7■■□□□ 12.1
SRSF1Q07955 BTBD19-207ENST00000485668 2659 ntTSL 216.82■□□□□ 0.285e-7■■□□□ 12.1
SRSF1Q07955 DGKD-204ENST00000430834 5379 ntTSL 1 (best)12.07□□□□□ -0.482e-10■■□□□ 12.1
SRSF1Q07955 DGKD-211ENST00000480535 453 ntTSL 311.96□□□□□ -0.492e-10■■□□□ 12.1
SRSF1Q07955 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.592e-10■■□□□ 12.1
SRSF1Q07955 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.72e-10■■□□□ 12.1
SRSF1Q07955 DGKD-213ENST00000490764 2902 ntTSL 1 (best)9.78□□□□□ -0.842e-10■■□□□ 12.1
SRSF1Q07955 PPOX-218ENST00000541818 1193 ntTSL 210.43□□□□□ -0.743e-8■■□□□ 12.1
SRSF1Q07955 PPOX-215ENST00000537523 734 ntTSL 310.41□□□□□ -0.743e-8■■□□□ 12.1
SRSF1Q07955 PPOX-216ENST00000537829 728 ntTSL 210.39□□□□□ -0.753e-8■■□□□ 12.1
SRSF1Q07955 PPOX-206ENST00000466452 784 ntTSL 28.53□□□□□ -1.043e-8■■□□□ 12.1
SRSF1Q07955 AL121845.3-203ENST00000496820 507 ntTSL 522.26■■□□□ 1.154e-8■■□□□ 12.1
SRSF1Q07955 CARS2-218ENST00000539269 795 ntTSL 327.86■■■□□ 2.052e-8■■□□□ 12.1
SRSF1Q07955 TBL2-207ENST00000435792 1109 ntTSL 325.48■■□□□ 1.676e-6■■□□□ 12.1
SRSF1Q07955 TBL2-211ENST00000452475 1262 ntTSL 324.58■■□□□ 1.536e-6■■□□□ 12.1
SRSF1Q07955 TBL2-221ENST00000496056 579 ntTSL 224.58■■□□□ 1.536e-6■■□□□ 12.1
SRSF1Q07955 TBL2-206ENST00000433464 1423 ntTSL 224.37■■□□□ 1.496e-6■■□□□ 12.1
SRSF1Q07955 TAOK3-217ENST00000542692 588 ntTSL 324.32■■□□□ 1.486e-6■■□□□ 12.1
SRSF1Q07955 TAOK3-216ENST00000542532 641 ntTSL 223.99■■□□□ 1.436e-6■■□□□ 12.1
SRSF1Q07955 TBL2-204ENST00000426966 1196 ntTSL 323.39■■□□□ 1.336e-6■■□□□ 12.1
SRSF1Q07955 TBL2-212ENST00000458466 673 ntTSL 323.29■■□□□ 1.326e-6■■□□□ 12.1
SRSF1Q07955 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.162e-8■■□□□ 12.1
SRSF1Q07955 APBB3-213ENST00000506958 987 ntTSL 319.82■□□□□ 0.766e-6■■□□□ 12.1
SRSF1Q07955 APBB3-207ENST00000503850 690 ntTSL 1 (best)19.15■□□□□ 0.666e-6■■□□□ 12.1
SRSF1Q07955 PI4KA-215ENST00000485963 2301 ntTSL 218.78■□□□□ 0.66e-6■■□□□ 12.1
SRSF1Q07955 CARS2-230ENST00000543487 870 ntTSL 518.16■□□□□ 0.52e-8■■□□□ 12.1
SRSF1Q07955 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.01■□□□□ 0.476e-6■■□□□ 12.1
SRSF1Q07955 TBL2-203ENST00000424598 2276 ntTSL 217.93■□□□□ 0.466e-6■■□□□ 12.1
SRSF1Q07955 APBB3-211ENST00000506165 560 ntTSL 217.61■□□□□ 0.416e-6■■□□□ 12.1
SRSF1Q07955 TBL2-209ENST00000450285 2209 ntTSL 1 (best)17.56■□□□□ 0.46e-6■■□□□ 12.1
SRSF1Q07955 CARS2-231ENST00000544488 575 ntTSL 417.38■□□□□ 0.372e-8■■□□□ 12.1
SRSF1Q07955 NBEAL2-211ENST00000486870 1076 ntTSL 217.18■□□□□ 0.346e-6■■□□□ 12.1
SRSF1Q07955 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17■□□□□ 0.316e-6■■□□□ 12.1
SRSF1Q07955 CARS2-209ENST00000535398 1878 ntTSL 216.78■□□□□ 0.282e-8■■□□□ 12.1
SRSF1Q07955 POLG-224ENST00000637711 142 ntTSL 516.75■□□□□ 0.276e-6■■□□□ 12.1
SRSF1Q07955 CARS2-206ENST00000481787 1223 ntTSL 516.5■□□□□ 0.232e-8■■□□□ 12.1
SRSF1Q07955 PI4KA-203ENST00000449120 574 ntTSL 416.14■□□□□ 0.176e-6■■□□□ 12.1
SRSF1Q07955 ADCK5-205ENST00000529654 2027 ntTSL 1 (best)15.74■□□□□ 0.116e-6■■□□□ 12.1
SRSF1Q07955 PAXX-202ENST00000463765 496 ntTSL 215.5■□□□□ 0.076e-6■■□□□ 12.1
SRSF1Q07955 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.066e-6■■□□□ 12.1
SRSF1Q07955 CARS2-203ENST00000465145 748 ntTSL 515.38■□□□□ 0.052e-8■■□□□ 12.1
SRSF1Q07955 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.026e-6■■□□□ 12.1
SRSF1Q07955 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.056e-6■■□□□ 12.1
SRSF1Q07955 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.076e-6■■□□□ 12.1
SRSF1Q07955 TBL2-202ENST00000417008 1717 ntTSL 514.48□□□□□ -0.096e-6■■□□□ 12.1
SRSF1Q07955 MLXIP-204ENST00000535430 1619 ntTSL 214.48□□□□□ -0.096e-6■■□□□ 12.1
SRSF1Q07955 ATXN2-218ENST00000549455 568 ntTSL 414.38□□□□□ -0.116e-6■■□□□ 12.1
SRSF1Q07955 TIMMDC1-205ENST00000486418 551 ntTSL 314.17□□□□□ -0.146e-6■■□□□ 12.1
SRSF1Q07955 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.156e-6■■□□□ 12.1
SRSF1Q07955 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.196e-6■■□□□ 12.1
SRSF1Q07955 ADCK5-203ENST00000526231 968 ntTSL 513.75□□□□□ -0.216e-6■■□□□ 12.1
SRSF1Q07955 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.256e-6■■□□□ 12.1
SRSF1Q07955 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.36e-6■■□□□ 12.1
SRSF1Q07955 AC116353.4-202ENST00000513766 558 ntTSL 513.09□□□□□ -0.316e-6■■□□□ 12.1
SRSF1Q07955 MAN2A2-211ENST00000559132 583 ntTSL 312.95□□□□□ -0.346e-6■■□□□ 12.1
SRSF1Q07955 TIMMDC1-201ENST00000264244 1271 ntTSL 1 (best)12.94□□□□□ -0.346e-6■■□□□ 12.1
SRSF1Q07955 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC12.94□□□□□ -0.346e-6■■□□□ 12.1
SRSF1Q07955 MRS2-206ENST00000483634 1750 ntTSL 212.79□□□□□ -0.366e-6■■□□□ 12.1
SRSF1Q07955 UBN1-203ENST00000585857 545 ntTSL 412.79□□□□□ -0.366e-6■■□□□ 12.1
SRSF1Q07955 MRS2-205ENST00000446191 546 ntTSL 312.48□□□□□ -0.416e-6■■□□□ 12.1
SRSF1Q07955 UBN1-206ENST00000587027 837 ntTSL 312.35□□□□□ -0.436e-6■■□□□ 12.1
SRSF1Q07955 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.436e-6■■□□□ 12.1
SRSF1Q07955 TIMMDC1-206ENST00000492164 725 ntTSL 312.13□□□□□ -0.476e-6■■□□□ 12.1
SRSF1Q07955 TIMMDC1-203ENST00000466984 605 ntTSL 511.68□□□□□ -0.546e-6■■□□□ 12.1
SRSF1Q07955 MLXIP-209ENST00000539861 1384 ntTSL 1 (best)11.54□□□□□ -0.566e-6■■□□□ 12.1
SRSF1Q07955 ATXN2-204ENST00000392645 2842 ntTSL 211.06□□□□□ -0.646e-6■■□□□ 12.1
SRSF1Q07955 NBEAL2-203ENST00000441027 636 ntTSL 311.06□□□□□ -0.646e-6■■□□□ 12.1
SRSF1Q07955 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.736e-6■■□□□ 12.1
SRSF1Q07955 MACF1-202ENST00000360115 2824 ntTSL 510.41□□□□□ -0.746e-6■■□□□ 12.1
SRSF1Q07955 TIMMDC1-208ENST00000494664 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.776e-6■■□□□ 12.1
SRSF1Q07955 MACF1-208ENST00000446276 2559 ntTSL 510.26□□□□□ -0.776e-6■■□□□ 12.1
SRSF1Q07955 APBB3-217ENST00000511459 547 ntTSL 410.16□□□□□ -0.786e-6■■□□□ 12.1
SRSF1Q07955 AL356585.3-201ENST00000625196 1017 ntBASIC10.14□□□□□ -0.796e-6■■□□□ 12.1
SRSF1Q07955 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.796e-6■■□□□ 12.1
SRSF1Q07955 SRSF11-213ENST00000481648 389 ntTSL 39.37□□□□□ -0.919e-7■■□□□ 12.1
SRSF1Q07955 NUP160-204ENST00000527126 527 ntTSL 29.34□□□□□ -0.916e-6■■□□□ 12.1
SRSF1Q07955 TIMMDC1-202ENST00000463927 670 ntTSL 59.1□□□□□ -0.956e-6■■□□□ 12.1
SRSF1Q07955 ATXN2-210ENST00000483311 4159 ntTSL 1 (best)9.06□□□□□ -0.966e-6■■□□□ 12.1
SRSF1Q07955 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.976e-6■■□□□ 12.1
SRSF1Q07955 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC8.4□□□□□ -1.066e-6■■□□□ 12.1
SRSF1Q07955 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.086e-6■■□□□ 12.1
SRSF1Q07955 MLXIP-207ENST00000538061 1078 ntTSL 38.27□□□□□ -1.096e-6■■□□□ 12.1
SRSF1Q07955 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.096e-6■■□□□ 12.1
SRSF1Q07955 TBL2-218ENST00000479892 494 ntTSL 47.44□□□□□ -1.226e-6■■□□□ 12.1
SRSF1Q07955 NCAPG2-205ENST00000441982 2926 ntTSL 27.32□□□□□ -1.246e-6■■□□□ 12.1
SRSF1Q07955 NCAPG2-204ENST00000432615 4134 ntTSL 57.15□□□□□ -1.266e-6■■□□□ 12.1
SRSF1Q07955 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.326e-6■■□□□ 12.1
SRSF1Q07955 ATXN2-217ENST00000548492 556 ntTSL 46.72□□□□□ -1.336e-6■■□□□ 12.1
SRSF1Q07955 NCAPG2-206ENST00000467785 3276 ntTSL 1 (best)6.38□□□□□ -1.396e-6■■□□□ 12.1
SRSF1Q07955 PIK3C3-214ENST00000591011 686 ntTSL 56.1□□□□□ -1.436e-6■■□□□ 12.1
SRSF1Q07955 CARS2-216ENST00000537743 466 ntTSL 55.95□□□□□ -1.462e-8■■□□□ 12.1
SRSF1Q07955 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC5.89□□□□□ -1.476e-6■■□□□ 12.1
SRSF1Q07955 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.476e-6■■□□□ 12.1
SRSF1Q07955 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.88□□□□□ -1.476e-6■■□□□ 12.1
SRSF1Q07955 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.84□□□□□ -1.476e-6■■□□□ 12.1
SRSF1Q07955 MACF1-226ENST00000497964 4160 ntTSL 25.75□□□□□ -1.496e-6■■□□□ 12.1
SRSF1Q07955 SPEN-202ENST00000438066 1733 ntTSL 35.58□□□□□ -1.526e-6■■□□□ 12.1
SRSF1Q07955 PIK3C3-211ENST00000589550 597 ntTSL 35.11□□□□□ -1.596e-6■■□□□ 12.1
SRSF1Q07955 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.626e-6■■□□□ 12.1
SRSF1Q07955 PIK3C3-203ENST00000585528 533 ntTSL 54.83□□□□□ -1.646e-6■■□□□ 12.1
Retrieved 100 of 14,836 protein–RNA pairs in 161.8 ms