Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
GABREP78334 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GABREP78334 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
GABREP78334 RNF165-205ENST00000588679 2904 ntBASIC18.12■□□□□ 0.49
GABREP78334 RASA4DP-201ENST00000460726 1199 ntBASIC18.12■□□□□ 0.49
GABREP78334 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.12■□□□□ 0.49
GABREP78334 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.12■□□□□ 0.49
GABREP78334 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.12■□□□□ 0.49
GABREP78334 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 CR769767.2-201ENST00000622735 460 ntBASIC18.12■□□□□ 0.49
GABREP78334 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
GABREP78334 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.12■□□□□ 0.49
GABREP78334 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
GABREP78334 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.12■□□□□ 0.49
GABREP78334 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
GABREP78334 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GABREP78334 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GABREP78334 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GABREP78334 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 AL845331.1-201ENST00000424978 1190 ntBASIC18.11■□□□□ 0.49
GABREP78334 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.11■□□□□ 0.49
GABREP78334 TSSC2-201ENST00000450217 709 ntBASIC18.11■□□□□ 0.49
GABREP78334 AC092597.1-201ENST00000487352 616 ntBASIC18.11■□□□□ 0.49
GABREP78334 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.11■□□□□ 0.49
GABREP78334 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.11■□□□□ 0.49
GABREP78334 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.11■□□□□ 0.49
GABREP78334 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.11■□□□□ 0.49
GABREP78334 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GABREP78334 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.11■□□□□ 0.49
GABREP78334 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GABREP78334 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GABREP78334 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GABREP78334 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.1■□□□□ 0.49
GABREP78334 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GABREP78334 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GABREP78334 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GABREP78334 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.1■□□□□ 0.49
GABREP78334 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.1■□□□□ 0.49
GABREP78334 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.1■□□□□ 0.49
GABREP78334 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GABREP78334 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.1■□□□□ 0.49
GABREP78334 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.1■□□□□ 0.49
GABREP78334 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
GABREP78334 BX276092.5-203ENST00000456199 560 ntBASIC18.1■□□□□ 0.49
GABREP78334 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.1■□□□□ 0.49
GABREP78334 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.1■□□□□ 0.49
GABREP78334 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.1■□□□□ 0.49
GABREP78334 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
GABREP78334 AL121672.3-201ENST00000608644 468 ntBASIC18.1■□□□□ 0.49
GABREP78334 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GABREP78334 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GABREP78334 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.1■□□□□ 0.49
GABREP78334 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GABREP78334 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GABREP78334 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
GABREP78334 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GABREP78334 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GABREP78334 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.1■□□□□ 0.49
GABREP78334 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GABREP78334 GABARAPL3-202ENST00000624044 1851 ntBASIC18.09■□□□□ 0.49
GABREP78334 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GABREP78334 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.09■□□□□ 0.49
GABREP78334 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
GABREP78334 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GABREP78334 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GABREP78334 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GABREP78334 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GABREP78334 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GABREP78334 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GABREP78334 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.09■□□□□ 0.49
GABREP78334 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GABREP78334 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GABREP78334 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
GABREP78334 AP005212.1-201ENST00000581547 1997 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms