Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RAB38P57729 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB38P57729 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 BX088651.1-201ENST00000540551 451 ntBASIC17.95■□□□□ 0.46
RAB38P57729 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RAB38P57729 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB38P57729 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RAB38P57729 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB38P57729 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB38P57729 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
RAB38P57729 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.95■□□□□ 0.46
RAB38P57729 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB38P57729 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB38P57729 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB38P57729 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB38P57729 MMP23A-201ENST00000234610 1017 ntBASIC17.94■□□□□ 0.46
RAB38P57729 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB38P57729 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB38P57729 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB38P57729 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.94■□□□□ 0.46
RAB38P57729 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB38P57729 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB38P57729 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.94■□□□□ 0.46
RAB38P57729 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB38P57729 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB38P57729 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB38P57729 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB38P57729 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB38P57729 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB38P57729 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB38P57729 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB38P57729 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB38P57729 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
RAB38P57729 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB38P57729 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB38P57729 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.93■□□□□ 0.46
RAB38P57729 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RAB38P57729 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RAB38P57729 AL161938.1-201ENST00000569833 2180 ntBASIC17.93■□□□□ 0.46
RAB38P57729 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB38P57729 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RAB38P57729 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB38P57729 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
RAB38P57729 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB38P57729 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB38P57729 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.92■□□□□ 0.46
RAB38P57729 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB38P57729 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.92■□□□□ 0.46
RAB38P57729 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB38P57729 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
RAB38P57729 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.92■□□□□ 0.46
RAB38P57729 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
RAB38P57729 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB38P57729 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB38P57729 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB38P57729 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB38P57729 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAB38P57729 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB38P57729 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB38P57729 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB38P57729 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB38P57729 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB38P57729 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB38P57729 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RAB38P57729 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB38P57729 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB38P57729 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB38P57729 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB38P57729 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB38P57729 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms