Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN8P56748 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN8P56748 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLDN8P56748 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN8P56748 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN8P56748 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.15■□□□□ 0.5
CLDN8P56748 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN8P56748 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN8P56748 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN8P56748 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN8P56748 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CLDN8P56748 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN8P56748 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN8P56748 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN8P56748 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN8P56748 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN8P56748 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.14■□□□□ 0.5
CLDN8P56748 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.14■□□□□ 0.5
CLDN8P56748 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN8P56748 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLDN8P56748 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN8P56748 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.14■□□□□ 0.49
CLDN8P56748 TSPY23P-201ENST00000440136 739 ntBASIC18.14■□□□□ 0.49
CLDN8P56748 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN8P56748 AC004264.1-201ENST00000608354 794 ntBASIC18.14■□□□□ 0.49
CLDN8P56748 AC092666.2-201ENST00000613287 246 ntBASIC18.14■□□□□ 0.49
CLDN8P56748 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.14■□□□□ 0.49
CLDN8P56748 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLDN8P56748 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLDN8P56748 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN8P56748 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
CLDN8P56748 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLDN8P56748 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN8P56748 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLDN8P56748 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN8P56748 AC005082.1-201ENST00000413042 2259 ntBASIC18.14■□□□□ 0.49
CLDN8P56748 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 AC079598.2-202ENST00000546624 1451 ntBASIC18.14■□□□□ 0.49
CLDN8P56748 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN8P56748 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 ANO7L1-203ENST00000602586 1720 ntBASIC18.13■□□□□ 0.49
CLDN8P56748 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLDN8P56748 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLDN8P56748 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN8P56748 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN8P56748 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN8P56748 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN8P56748 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN8P56748 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN8P56748 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLDN8P56748 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN8P56748 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN8P56748 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CLDN8P56748 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN8P56748 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN8P56748 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms