Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CLDN6P56747 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN6P56747 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN6P56747 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN6P56747 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN6P56747 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN6P56747 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLDN6P56747 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 AL691432.2-201ENST00000607222 2038 ntBASIC18.31■□□□□ 0.52
CLDN6P56747 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN6P56747 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN6P56747 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 RASA4DP-201ENST00000460726 1199 ntBASIC18.3■□□□□ 0.52
CLDN6P56747 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.3■□□□□ 0.52
CLDN6P56747 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 MIR3180-1-201ENST00000580374 94 ntBASIC18.3■□□□□ 0.52
CLDN6P56747 MIR3180-3-201ENST00000584616 94 ntBASIC18.3■□□□□ 0.52
CLDN6P56747 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN6P56747 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLDN6P56747 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN6P56747 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN6P56747 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN6P56747 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CLDN6P56747 AL157384.1-201ENST00000445995 2473 ntBASIC18.29■□□□□ 0.52
CLDN6P56747 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLDN6P56747 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN6P56747 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN6P56747 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN6P56747 AP002383.4-201ENST00000442518 975 ntBASIC18.29■□□□□ 0.52
CLDN6P56747 TSSC2-201ENST00000450217 709 ntBASIC18.29■□□□□ 0.52
CLDN6P56747 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN6P56747 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN6P56747 AC024243.1-201ENST00000609234 778 ntBASIC18.29■□□□□ 0.52
CLDN6P56747 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN6P56747 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN6P56747 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLDN6P56747 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN6P56747 AC016734.2-201ENST00000624325 1377 ntBASIC18.29■□□□□ 0.52
CLDN6P56747 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN6P56747 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN6P56747 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLDN6P56747 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.28■□□□□ 0.52
CLDN6P56747 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.28■□□□□ 0.52
CLDN6P56747 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.28■□□□□ 0.52
CLDN6P56747 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN6P56747 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN6P56747 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLDN6P56747 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN6P56747 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN6P56747 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLDN6P56747 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN6P56747 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CLDN6P56747 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms