Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.04■□□□□ 0.48
NR1H2P55055 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.04■□□□□ 0.48
NR1H2P55055 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H2P55055 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H2P55055 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NR1H2P55055 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H2P55055 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H2P55055 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H2P55055 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NR1H2P55055 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NR1H2P55055 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.04■□□□□ 0.48
NR1H2P55055 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.04■□□□□ 0.48
NR1H2P55055 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.04■□□□□ 0.48
NR1H2P55055 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H2P55055 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NR1H2P55055 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H2P55055 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H2P55055 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.04■□□□□ 0.48
NR1H2P55055 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.04■□□□□ 0.48
NR1H2P55055 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NR1H2P55055 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NR1H2P55055 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H2P55055 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NR1H2P55055 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.03■□□□□ 0.48
NR1H2P55055 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.03■□□□□ 0.48
NR1H2P55055 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NR1H2P55055 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.03■□□□□ 0.48
NR1H2P55055 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NR1H2P55055 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 POU5F1P3-201ENST00000428824 1078 ntBASIC18.03■□□□□ 0.48
NR1H2P55055 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NR1H2P55055 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H2P55055 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NR1H2P55055 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NR1H2P55055 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.03■□□□□ 0.48
NR1H2P55055 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H2P55055 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.02■□□□□ 0.48
NR1H2P55055 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H2P55055 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
NR1H2P55055 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.02■□□□□ 0.48
NR1H2P55055 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.02■□□□□ 0.48
NR1H2P55055 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
NR1H2P55055 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H2P55055 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
NR1H2P55055 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H2P55055 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NR1H2P55055 LSM12P1-201ENST00000411836 588 ntBASIC18.02■□□□□ 0.48
NR1H2P55055 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H2P55055 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NR1H2P55055 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.02■□□□□ 0.48
NR1H2P55055 BCL2-203ENST00000589955 5011 ntBASIC18.02■□□□□ 0.48
NR1H2P55055 AC100791.3-201ENST00000617619 330 ntBASIC18.02■□□□□ 0.48
NR1H2P55055 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H2P55055 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NR1H2P55055 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NR1H2P55055 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H2P55055 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.47
NR1H2P55055 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.02■□□□□ 0.47
NR1H2P55055 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.02■□□□□ 0.47
NR1H2P55055 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
NR1H2P55055 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.02■□□□□ 0.47
NR1H2P55055 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NR1H2P55055 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NR1H2P55055 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
NR1H2P55055 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
NR1H2P55055 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NR1H2P55055 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NR1H2P55055 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.01■□□□□ 0.47
NR1H2P55055 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NR1H2P55055 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H2P55055 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.01■□□□□ 0.47
NR1H2P55055 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.01■□□□□ 0.47
NR1H2P55055 AC093525.10-201ENST00000625130 1569 ntBASIC18.01■□□□□ 0.47
NR1H2P55055 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H2P55055 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H2P55055 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.01■□□□□ 0.47
NR1H2P55055 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.01■□□□□ 0.47
NR1H2P55055 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NR1H2P55055 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.01■□□□□ 0.47
NR1H2P55055 AC091874.3-201ENST00000512672 1195 ntBASIC18.01■□□□□ 0.47
NR1H2P55055 MYC-209ENST00000641252 345 ntBASIC18.01■□□□□ 0.47
NR1H2P55055 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H2P55055 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H2P55055 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NR1H2P55055 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H2P55055 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms