Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.73■□□□□ 0.59
GTF2A1P52655 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GTF2A1P52655 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GTF2A1P52655 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GTF2A1P52655 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
GTF2A1P52655 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
GTF2A1P52655 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
GTF2A1P52655 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2A1P52655 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2A1P52655 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2A1P52655 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2A1P52655 GNAS-203ENST00000306120 1878 ntBASIC18.72■□□□□ 0.59
GTF2A1P52655 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.72■□□□□ 0.59
GTF2A1P52655 PCDHA1-201ENST00000378133 2726 ntBASIC18.72■□□□□ 0.59
GTF2A1P52655 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2A1P52655 AC099791.2-201ENST00000605725 427 ntBASIC18.72■□□□□ 0.59
GTF2A1P52655 AC068587.7-201ENST00000641602 218 ntBASIC18.72■□□□□ 0.59
GTF2A1P52655 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2A1P52655 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2A1P52655 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.72■□□□□ 0.59
GTF2A1P52655 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2A1P52655 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
GTF2A1P52655 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2A1P52655 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.72■□□□□ 0.59
GTF2A1P52655 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.72■□□□□ 0.59
GTF2A1P52655 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
GTF2A1P52655 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
GTF2A1P52655 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2A1P52655 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.72■□□□□ 0.59
GTF2A1P52655 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.72■□□□□ 0.59
GTF2A1P52655 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.72■□□□□ 0.59
GTF2A1P52655 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2A1P52655 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.71■□□□□ 0.59
GTF2A1P52655 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.71■□□□□ 0.59
GTF2A1P52655 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
GTF2A1P52655 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.71■□□□□ 0.59
GTF2A1P52655 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GTF2A1P52655 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.71■□□□□ 0.59
GTF2A1P52655 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.71■□□□□ 0.59
GTF2A1P52655 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GTF2A1P52655 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 MIR6724-1-201ENST00000616420 92 ntBASIC18.71■□□□□ 0.59
GTF2A1P52655 MIR6724-2-201ENST00000616483 92 ntBASIC18.71■□□□□ 0.59
GTF2A1P52655 MIR6724-4-201ENST00000617390 92 ntBASIC18.71■□□□□ 0.59
GTF2A1P52655 MIR6724-3-201ENST00000622482 92 ntBASIC18.71■□□□□ 0.59
GTF2A1P52655 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
GTF2A1P52655 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GTF2A1P52655 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
GTF2A1P52655 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GTF2A1P52655 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2A1P52655 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
GTF2A1P52655 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.7■□□□□ 0.58
GTF2A1P52655 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GTF2A1P52655 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
GTF2A1P52655 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GTF2A1P52655 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.7■□□□□ 0.58
GTF2A1P52655 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GTF2A1P52655 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.7■□□□□ 0.58
GTF2A1P52655 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.7■□□□□ 0.58
GTF2A1P52655 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.7■□□□□ 0.58
GTF2A1P52655 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.7■□□□□ 0.58
GTF2A1P52655 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2A1P52655 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GTF2A1P52655 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2A1P52655 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.69■□□□□ 0.58
GTF2A1P52655 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2A1P52655 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms