Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PDE6CP51160 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PDE6CP51160 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6CP51160 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6CP51160 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6CP51160 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE6CP51160 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE6CP51160 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.61■□□□□ 0.89
PDE6CP51160 C1QL1P1-201ENST00000568105 661 ntBASIC20.61■□□□□ 0.89
PDE6CP51160 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.61■□□□□ 0.89
PDE6CP51160 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6CP51160 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE6CP51160 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PDE6CP51160 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.61■□□□□ 0.89
PDE6CP51160 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6CP51160 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6CP51160 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6CP51160 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6CP51160 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PDE6CP51160 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6CP51160 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6CP51160 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PDE6CP51160 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.6■□□□□ 0.89
PDE6CP51160 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.6■□□□□ 0.89
PDE6CP51160 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6CP51160 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6CP51160 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6CP51160 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6CP51160 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.6■□□□□ 0.89
PDE6CP51160 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6CP51160 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.6■□□□□ 0.89
PDE6CP51160 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PDE6CP51160 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.6■□□□□ 0.89
PDE6CP51160 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.6■□□□□ 0.89
PDE6CP51160 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6CP51160 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.6■□□□□ 0.89
PDE6CP51160 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.6■□□□□ 0.89
PDE6CP51160 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PDE6CP51160 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.6■□□□□ 0.89
PDE6CP51160 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.6■□□□□ 0.89
PDE6CP51160 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PDE6CP51160 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6CP51160 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6CP51160 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.6■□□□□ 0.89
PDE6CP51160 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.59■□□□□ 0.89
PDE6CP51160 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
PDE6CP51160 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PDE6CP51160 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PDE6CP51160 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6CP51160 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6CP51160 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.59■□□□□ 0.89
PDE6CP51160 KSR1P1-201ENST00000446298 240 ntBASIC20.59■□□□□ 0.89
PDE6CP51160 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6CP51160 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6CP51160 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6CP51160 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.59■□□□□ 0.89
PDE6CP51160 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6CP51160 LINC01023-201ENST00000606054 436 ntBASIC20.59■□□□□ 0.89
PDE6CP51160 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6CP51160 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PDE6CP51160 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6CP51160 TNXA-203ENST00000507684 2038 ntBASIC20.59■□□□□ 0.89
PDE6CP51160 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PDE6CP51160 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PDE6CP51160 AL161938.1-201ENST00000569833 2180 ntBASIC20.59■□□□□ 0.89
PDE6CP51160 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6CP51160 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
PDE6CP51160 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6CP51160 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.59■□□□□ 0.89
PDE6CP51160 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6CP51160 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.89
PDE6CP51160 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6CP51160 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6CP51160 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PDE6CP51160 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6CP51160 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6CP51160 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6CP51160 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.58■□□□□ 0.89
PDE6CP51160 AP003071.4-201ENST00000562276 1284 ntBASIC20.58■□□□□ 0.89
PDE6CP51160 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.58■□□□□ 0.89
PDE6CP51160 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6CP51160 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6CP51160 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.58■□□□□ 0.88
PDE6CP51160 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PDE6CP51160 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDE6CP51160 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PDE6CP51160 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms