Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LHX2P50458 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX2P50458 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX2P50458 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.04■□□□□ 0.32
LHX2P50458 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LHX2P50458 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
LHX2P50458 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LHX2P50458 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
LHX2P50458 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX2P50458 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX2P50458 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.04■□□□□ 0.32
LHX2P50458 AC010331.1-201ENST00000611423 582 ntBASIC17.04■□□□□ 0.32
LHX2P50458 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LHX2P50458 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
LHX2P50458 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LHX2P50458 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX2P50458 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX2P50458 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
LHX2P50458 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LHX2P50458 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX2P50458 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX2P50458 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX2P50458 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.03■□□□□ 0.32
LHX2P50458 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX2P50458 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LHX2P50458 AC141586.3-201ENST00000562166 1838 ntBASIC17.03■□□□□ 0.32
LHX2P50458 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX2P50458 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LHX2P50458 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LHX2P50458 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX2P50458 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX2P50458 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX2P50458 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX2P50458 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
LHX2P50458 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.03■□□□□ 0.32
LHX2P50458 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX2P50458 AL512604.3-201ENST00000569583 964 ntBASIC17.03■□□□□ 0.32
LHX2P50458 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.03■□□□□ 0.32
LHX2P50458 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX2P50458 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LHX2P50458 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX2P50458 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX2P50458 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LHX2P50458 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
LHX2P50458 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX2P50458 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LHX2P50458 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX2P50458 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX2P50458 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX2P50458 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LHX2P50458 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LHX2P50458 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
LHX2P50458 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
LHX2P50458 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX2P50458 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX2P50458 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LHX2P50458 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX2P50458 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX2P50458 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX2P50458 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX2P50458 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX2P50458 BX664615.1-201ENST00000443558 458 ntBASIC17.02■□□□□ 0.32
LHX2P50458 AC104076.2-201ENST00000448912 469 ntBASIC17.02■□□□□ 0.32
LHX2P50458 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX2P50458 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX2P50458 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX2P50458 AC008622.2-201ENST00000617006 1229 ntBASIC17.02■□□□□ 0.32
LHX2P50458 AC006011.2-201ENST00000621313 1158 ntBASIC17.02■□□□□ 0.32
LHX2P50458 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
LHX2P50458 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX2P50458 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LHX2P50458 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LHX2P50458 AL032819.2-201ENST00000624543 2162 ntBASIC17.02■□□□□ 0.31
LHX2P50458 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.02■□□□□ 0.31
LHX2P50458 AC007952.6-201ENST00000573168 2673 ntBASIC17.02■□□□□ 0.31
LHX2P50458 AC003957.1-201ENST00000625108 2673 ntBASIC17.02■□□□□ 0.31
LHX2P50458 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LHX2P50458 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LHX2P50458 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LHX2P50458 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.01■□□□□ 0.31
LHX2P50458 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LHX2P50458 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.01■□□□□ 0.31
LHX2P50458 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms