Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP8P40818 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 AC104417.2-201ENST00000562989 1793 ntBASIC20.75■□□□□ 0.91
USP8P40818 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
USP8P40818 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.75■□□□□ 0.91
USP8P40818 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.75■□□□□ 0.91
USP8P40818 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP8P40818 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.75■□□□□ 0.91
USP8P40818 AC004264.1-201ENST00000608354 794 ntBASIC20.75■□□□□ 0.91
USP8P40818 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
USP8P40818 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.75■□□□□ 0.91
USP8P40818 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.75■□□□□ 0.91
USP8P40818 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP8P40818 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 LINC01465-201ENST00000408887 1940 ntBASIC20.74■□□□□ 0.91
USP8P40818 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
USP8P40818 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
USP8P40818 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
USP8P40818 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.74■□□□□ 0.91
USP8P40818 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.74■□□□□ 0.91
USP8P40818 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.74■□□□□ 0.91
USP8P40818 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP8P40818 TEX21P-204ENST00000641479 1693 ntBASIC20.73■□□□□ 0.91
USP8P40818 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
USP8P40818 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
USP8P40818 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
USP8P40818 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.73■□□□□ 0.91
USP8P40818 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.73■□□□□ 0.91
USP8P40818 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.73■□□□□ 0.91
USP8P40818 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.73■□□□□ 0.91
USP8P40818 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.73■□□□□ 0.91
USP8P40818 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
USP8P40818 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.73■□□□□ 0.91
USP8P40818 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.73■□□□□ 0.91
USP8P40818 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.73■□□□□ 0.91
USP8P40818 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
USP8P40818 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
USP8P40818 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP8P40818 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP8P40818 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
USP8P40818 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP8P40818 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.72■□□□□ 0.91
USP8P40818 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP8P40818 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
USP8P40818 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP8P40818 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP8P40818 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
USP8P40818 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP8P40818 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.72■□□□□ 0.91
USP8P40818 POU5F1P3-201ENST00000428824 1078 ntBASIC20.72■□□□□ 0.91
USP8P40818 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.72■□□□□ 0.91
USP8P40818 AC128676.1-201ENST00000454392 318 ntBASIC20.72■□□□□ 0.91
USP8P40818 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.72■□□□□ 0.91
USP8P40818 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP8P40818 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.72■□□□□ 0.91
USP8P40818 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.72■□□□□ 0.91
USP8P40818 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.72■□□□□ 0.91
USP8P40818 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP8P40818 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms