Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 WDR53-203ENST00000429115 683 ntTSL 2 BASIC25.05■■□□□ 1.6
RXRBP28702 AP006288.1-201ENST00000446065 395 ntBASIC25.05■■□□□ 1.6
RXRBP28702 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC25.05■■□□□ 1.6
RXRBP28702 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC25.05■■□□□ 1.6
RXRBP28702 AL596442.2-201ENST00000610240 980 ntBASIC25.05■■□□□ 1.6
RXRBP28702 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC25.05■■□□□ 1.6
RXRBP28702 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RXRBP28702 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RXRBP28702 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.05■■□□□ 1.6
RXRBP28702 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
RXRBP28702 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.05■■□□□ 1.6
RXRBP28702 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.04■■□□□ 1.6
RXRBP28702 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RXRBP28702 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RXRBP28702 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RXRBP28702 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RXRBP28702 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RXRBP28702 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
RXRBP28702 AL023284.2-201ENST00000405850 579 ntBASIC25.04■■□□□ 1.6
RXRBP28702 AC004832.2-201ENST00000426397 482 ntBASIC25.04■■□□□ 1.6
RXRBP28702 KRT18P23-201ENST00000435622 1283 ntBASIC25.04■■□□□ 1.6
RXRBP28702 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC25.04■■□□□ 1.6
RXRBP28702 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.04■■□□□ 1.6
RXRBP28702 MIR3180-5-201ENST00000583743 153 ntBASIC25.04■■□□□ 1.6
RXRBP28702 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
RXRBP28702 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RXRBP28702 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RXRBP28702 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RXRBP28702 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
RXRBP28702 SYS1-203ENST00000414310 795 ntTSL 3 BASIC25.03■■□□□ 1.6
RXRBP28702 PON3-203ENST00000427422 894 ntTSL 3 BASIC25.03■■□□□ 1.6
RXRBP28702 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RXRBP28702 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC25.03■■□□□ 1.6
RXRBP28702 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RXRBP28702 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RXRBP28702 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
RXRBP28702 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RXRBP28702 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RXRBP28702 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RXRBP28702 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RXRBP28702 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RXRBP28702 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.02■■□□□ 1.6
RXRBP28702 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
RXRBP28702 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC25.02■■□□□ 1.6
RXRBP28702 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RXRBP28702 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC25.02■■□□□ 1.6
RXRBP28702 AC011467.4-201ENST00000594891 528 ntBASIC25.02■■□□□ 1.6
RXRBP28702 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC25.02■■□□□ 1.6
RXRBP28702 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC25.02■■□□□ 1.6
RXRBP28702 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RXRBP28702 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RXRBP28702 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RXRBP28702 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC25.01■■□□□ 1.59
RXRBP28702 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RXRBP28702 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RXRBP28702 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC25.01■■□□□ 1.59
RXRBP28702 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RXRBP28702 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RXRBP28702 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC25.01■■□□□ 1.59
RXRBP28702 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.01■■□□□ 1.59
RXRBP28702 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RXRBP28702 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RXRBP28702 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RXRBP28702 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RXRBP28702 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.01■■□□□ 1.59
RXRBP28702 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC25.01■■□□□ 1.59
RXRBP28702 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25■■□□□ 1.59
RXRBP28702 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC25■■□□□ 1.59
RXRBP28702 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25■■□□□ 1.59
RXRBP28702 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
RXRBP28702 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
RXRBP28702 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RXRBP28702 MIR770-201ENST00000390219 98 ntBASIC25■■□□□ 1.59
RXRBP28702 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC25■■□□□ 1.59
RXRBP28702 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC25■■□□□ 1.59
RXRBP28702 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC25■■□□□ 1.59
RXRBP28702 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25■■□□□ 1.59
RXRBP28702 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RXRBP28702 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
RXRBP28702 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RXRBP28702 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25■■□□□ 1.59
RXRBP28702 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RXRBP28702 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RXRBP28702 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RXRBP28702 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RXRBP28702 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RXRBP28702 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RXRBP28702 DDT-203ENST00000403754 569 ntTSL 3 BASIC24.99■■□□□ 1.59
RXRBP28702 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC24.99■■□□□ 1.59
RXRBP28702 AL645939.2-201ENST00000427340 991 ntBASIC24.99■■□□□ 1.59
RXRBP28702 FGFR3P6-201ENST00000457012 610 ntBASIC24.99■■□□□ 1.59
RXRBP28702 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC24.99■■□□□ 1.59
RXRBP28702 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC24.99■■□□□ 1.59
RXRBP28702 BNIP3P18-201ENST00000593976 575 ntBASIC24.99■■□□□ 1.59
RXRBP28702 Z83851.2-201ENST00000609564 659 ntBASIC24.99■■□□□ 1.59
RXRBP28702 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms