Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MMP8P22894 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MMP8P22894 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MMP8P22894 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.07■□□□□ 0.8
MMP8P22894 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.07■□□□□ 0.8
MMP8P22894 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.07■□□□□ 0.8
MMP8P22894 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 AC012618.2-201ENST00000428058 849 ntBASIC20.07■□□□□ 0.8
MMP8P22894 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.07■□□□□ 0.8
MMP8P22894 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.07■□□□□ 0.8
MMP8P22894 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.07■□□□□ 0.8
MMP8P22894 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
MMP8P22894 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.07■□□□□ 0.8
MMP8P22894 AC233702.5-201ENST00000584107 538 ntBASIC20.07■□□□□ 0.8
MMP8P22894 MIR6786-201ENST00000616843 113 ntBASIC20.07■□□□□ 0.8
MMP8P22894 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 AC093525.10-201ENST00000625130 1569 ntBASIC20.07■□□□□ 0.8
MMP8P22894 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.07■□□□□ 0.8
MMP8P22894 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP8P22894 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
MMP8P22894 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP8P22894 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP8P22894 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
MMP8P22894 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP8P22894 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP8P22894 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP8P22894 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MMP8P22894 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP8P22894 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.06■□□□□ 0.8
MMP8P22894 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP8P22894 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP8P22894 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP8P22894 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP8P22894 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP8P22894 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP8P22894 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
MMP8P22894 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP8P22894 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP8P22894 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.06■□□□□ 0.8
MMP8P22894 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP8P22894 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP8P22894 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP8P22894 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MMP8P22894 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.05■□□□□ 0.8
MMP8P22894 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.05■□□□□ 0.8
MMP8P22894 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.05■□□□□ 0.8
MMP8P22894 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
MMP8P22894 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP8P22894 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP8P22894 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
MMP8P22894 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.05■□□□□ 0.8
MMP8P22894 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.05■□□□□ 0.8
MMP8P22894 AL138781.2-201ENST00000617896 1843 ntBASIC20.05■□□□□ 0.8
MMP8P22894 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
MMP8P22894 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.05■□□□□ 0.8
MMP8P22894 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MMP8P22894 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.05■□□□□ 0.8
MMP8P22894 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.05■□□□□ 0.8
MMP8P22894 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.05■□□□□ 0.8
MMP8P22894 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.05■□□□□ 0.8
MMP8P22894 TMEM191A-211ENST00000637163 1067 ntBASIC20.05■□□□□ 0.8
MMP8P22894 AC083906.6-201ENST00000641366 219 ntBASIC20.05■□□□□ 0.8
MMP8P22894 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.05■□□□□ 0.8
MMP8P22894 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.05■□□□□ 0.8
MMP8P22894 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP8P22894 AL031598.1-201ENST00000561511 1773 ntBASIC20.05■□□□□ 0.8
MMP8P22894 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.05■□□□□ 0.8
MMP8P22894 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP8P22894 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP8P22894 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP8P22894 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP8P22894 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP8P22894 FSCN1P1-201ENST00000568912 1481 ntBASIC20.05■□□□□ 0.8
MMP8P22894 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.04■□□□□ 0.8
MMP8P22894 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.04■□□□□ 0.8
MMP8P22894 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.04■□□□□ 0.8
MMP8P22894 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP8P22894 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms