Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDH3P22223 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH3P22223 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDH3P22223 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH3P22223 NEFHP1-201ENST00000412845 2629 ntBASIC18.66■□□□□ 0.58
CDH3P22223 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.66■□□□□ 0.58
CDH3P22223 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 AC211429.1-201ENST00000415277 523 ntBASIC18.66■□□□□ 0.58
CDH3P22223 ECEL1P3-201ENST00000427961 737 ntBASIC18.66■□□□□ 0.58
CDH3P22223 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH3P22223 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH3P22223 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH3P22223 AC133561.5-201ENST00000635547 218 ntBASIC18.66■□□□□ 0.58
CDH3P22223 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDH3P22223 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDH3P22223 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
CDH3P22223 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH3P22223 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH3P22223 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH3P22223 AC079598.2-202ENST00000546624 1451 ntBASIC18.65■□□□□ 0.58
CDH3P22223 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH3P22223 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDH3P22223 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH3P22223 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 LTB4R2-202ENST00000528054 3092 ntBASIC18.65■□□□□ 0.58
CDH3P22223 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 MIR1238-201ENST00000408483 83 ntBASIC18.65■□□□□ 0.58
CDH3P22223 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.65■□□□□ 0.58
CDH3P22223 B3GAT3P1-201ENST00000471720 806 ntBASIC18.65■□□□□ 0.58
CDH3P22223 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.65■□□□□ 0.58
CDH3P22223 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH3P22223 LINC01023-201ENST00000606054 436 ntBASIC18.65■□□□□ 0.58
CDH3P22223 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH3P22223 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CDH3P22223 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDH3P22223 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH3P22223 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH3P22223 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDH3P22223 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH3P22223 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH3P22223 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH3P22223 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CDH3P22223 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH3P22223 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH3P22223 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH3P22223 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH3P22223 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH3P22223 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH3P22223 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH3P22223 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH3P22223 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH3P22223 AC011506.1-201ENST00000474329 610 ntBASIC18.64■□□□□ 0.57
CDH3P22223 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH3P22223 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH3P22223 AL160286.2-201ENST00000567150 934 ntBASIC18.64■□□□□ 0.57
CDH3P22223 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH3P22223 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.64■□□□□ 0.57
CDH3P22223 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDH3P22223 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH3P22223 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH3P22223 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CDH3P22223 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH3P22223 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH3P22223 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDH3P22223 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH3P22223 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH3P22223 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH3P22223 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH3P22223 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH3P22223 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH3P22223 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
CDH3P22223 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH3P22223 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH3P22223 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms