Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.61
NELFEP18615 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
NELFEP18615 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NELFEP18615 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NELFEP18615 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.83■□□□□ 0.61
NELFEP18615 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
NELFEP18615 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NELFEP18615 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NELFEP18615 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NELFEP18615 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.83■□□□□ 0.6
NELFEP18615 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.83■□□□□ 0.6
NELFEP18615 AC087499.1-201ENST00000418141 1075 ntBASIC18.83■□□□□ 0.6
NELFEP18615 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.83■□□□□ 0.6
NELFEP18615 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.83■□□□□ 0.6
NELFEP18615 CR392000.1-201ENST00000624770 1228 ntBASIC18.83■□□□□ 0.6
NELFEP18615 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.83■□□□□ 0.6
NELFEP18615 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NELFEP18615 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NELFEP18615 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.83■□□□□ 0.6
NELFEP18615 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NELFEP18615 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NELFEP18615 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NELFEP18615 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NELFEP18615 KRT16P1-201ENST00000399124 1418 ntBASIC18.83■□□□□ 0.6
NELFEP18615 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 BX119927.1-201ENST00000636596 1552 ntBASIC18.82■□□□□ 0.6
NELFEP18615 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NELFEP18615 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.82■□□□□ 0.6
NELFEP18615 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.82■□□□□ 0.6
NELFEP18615 KRT18P16-201ENST00000510337 1294 ntBASIC18.82■□□□□ 0.6
NELFEP18615 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.82■□□□□ 0.6
NELFEP18615 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.82■□□□□ 0.6
NELFEP18615 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NELFEP18615 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.82■□□□□ 0.6
NELFEP18615 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NELFEP18615 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NELFEP18615 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NELFEP18615 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.82■□□□□ 0.6
NELFEP18615 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
NELFEP18615 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
NELFEP18615 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NELFEP18615 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.81■□□□□ 0.6
NELFEP18615 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NELFEP18615 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NELFEP18615 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NELFEP18615 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 TUBB8P6-201ENST00000436895 1288 ntBASIC18.81■□□□□ 0.6
NELFEP18615 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.81■□□□□ 0.6
NELFEP18615 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.81■□□□□ 0.6
NELFEP18615 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
NELFEP18615 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.81■□□□□ 0.6
NELFEP18615 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.81■□□□□ 0.6
NELFEP18615 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.81■□□□□ 0.6
NELFEP18615 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.81■□□□□ 0.6
NELFEP18615 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NELFEP18615 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.81■□□□□ 0.6
NELFEP18615 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NELFEP18615 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NELFEP18615 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NELFEP18615 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NELFEP18615 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NELFEP18615 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.8■□□□□ 0.6
NELFEP18615 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NELFEP18615 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NELFEP18615 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NELFEP18615 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NELFEP18615 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NELFEP18615 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NELFEP18615 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NELFEP18615 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NELFEP18615 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NELFEP18615 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.8■□□□□ 0.6
NELFEP18615 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NELFEP18615 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.8■□□□□ 0.6
NELFEP18615 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.8■□□□□ 0.6
NELFEP18615 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms