Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.03■□□□□ 0.48
NCK1P16333 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.03■□□□□ 0.48
NCK1P16333 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.03■□□□□ 0.48
NCK1P16333 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NCK1P16333 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.03■□□□□ 0.48
NCK1P16333 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.03■□□□□ 0.48
NCK1P16333 AC231657.2-201ENST00000624556 255 ntBASIC18.03■□□□□ 0.48
NCK1P16333 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.03■□□□□ 0.48
NCK1P16333 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.03■□□□□ 0.48
NCK1P16333 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
NCK1P16333 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.03■□□□□ 0.48
NCK1P16333 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NCK1P16333 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NCK1P16333 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.02■□□□□ 0.48
NCK1P16333 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.02■□□□□ 0.48
NCK1P16333 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
NCK1P16333 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
NCK1P16333 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.02■□□□□ 0.48
NCK1P16333 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.02■□□□□ 0.48
NCK1P16333 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.02■□□□□ 0.48
NCK1P16333 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCK1P16333 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.02■□□□□ 0.47
NCK1P16333 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCK1P16333 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NCK1P16333 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
NCK1P16333 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.02■□□□□ 0.47
NCK1P16333 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCK1P16333 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCK1P16333 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCK1P16333 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCK1P16333 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
NCK1P16333 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
NCK1P16333 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.01■□□□□ 0.47
NCK1P16333 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.01■□□□□ 0.47
NCK1P16333 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
NCK1P16333 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCK1P16333 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.01■□□□□ 0.47
NCK1P16333 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.01■□□□□ 0.47
NCK1P16333 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCK1P16333 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCK1P16333 AC006015.1-201ENST00000429970 570 ntBASIC18.01■□□□□ 0.47
NCK1P16333 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.01■□□□□ 0.47
NCK1P16333 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.01■□□□□ 0.47
NCK1P16333 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NCK1P16333 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
NCK1P16333 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.01■□□□□ 0.47
NCK1P16333 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCK1P16333 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NCK1P16333 AC067852.2-201ENST00000590513 2313 ntBASIC18.01■□□□□ 0.47
NCK1P16333 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCK1P16333 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCK1P16333 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCK1P16333 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCK1P16333 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCK1P16333 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCK1P16333 AP000997.3-201ENST00000623333 2250 ntBASIC18.01■□□□□ 0.47
NCK1P16333 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCK1P16333 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NCK1P16333 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NCK1P16333 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18■□□□□ 0.47
NCK1P16333 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCK1P16333 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18■□□□□ 0.47
NCK1P16333 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18■□□□□ 0.47
NCK1P16333 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18■□□□□ 0.47
NCK1P16333 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCK1P16333 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18■□□□□ 0.47
NCK1P16333 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NCK1P16333 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18■□□□□ 0.47
NCK1P16333 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18■□□□□ 0.47
NCK1P16333 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NCK1P16333 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NCK1P16333 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCK1P16333 AL512625.2-201ENST00000417533 625 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms