Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPP3CBP16298 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPP3CBP16298 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP3CBP16298 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPP3CBP16298 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 AC125437.2-201ENST00000625180 2167 ntBASIC17.09■□□□□ 0.33
PPP3CBP16298 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PPP3CBP16298 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.09■□□□□ 0.33
PPP3CBP16298 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PPP3CBP16298 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PPP3CBP16298 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.09■□□□□ 0.33
PPP3CBP16298 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.09■□□□□ 0.33
PPP3CBP16298 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PPP3CBP16298 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PPP3CBP16298 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PPP3CBP16298 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PPP3CBP16298 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.09■□□□□ 0.33
PPP3CBP16298 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PPP3CBP16298 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PPP3CBP16298 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.09■□□□□ 0.33
PPP3CBP16298 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP3CBP16298 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PPP3CBP16298 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.08■□□□□ 0.33
PPP3CBP16298 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PPP3CBP16298 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.08■□□□□ 0.33
PPP3CBP16298 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PPP3CBP16298 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PPP3CBP16298 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PPP3CBP16298 BX119927.1-201ENST00000636596 1552 ntBASIC17.08■□□□□ 0.32
PPP3CBP16298 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPP3CBP16298 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPP3CBP16298 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPP3CBP16298 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.08■□□□□ 0.32
PPP3CBP16298 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.08■□□□□ 0.32
PPP3CBP16298 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.08■□□□□ 0.32
PPP3CBP16298 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.08■□□□□ 0.32
PPP3CBP16298 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
PPP3CBP16298 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.08■□□□□ 0.32
PPP3CBP16298 FITM1-202ENST00000559294 800 ntBASIC17.08■□□□□ 0.32
PPP3CBP16298 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.08■□□□□ 0.32
PPP3CBP16298 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
PPP3CBP16298 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PPP3CBP16298 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPP3CBP16298 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPP3CBP16298 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPP3CBP16298 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
PPP3CBP16298 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.08■□□□□ 0.32
PPP3CBP16298 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PPP3CBP16298 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.07■□□□□ 0.32
PPP3CBP16298 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.07■□□□□ 0.32
PPP3CBP16298 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.07■□□□□ 0.32
PPP3CBP16298 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.07■□□□□ 0.32
PPP3CBP16298 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.07■□□□□ 0.32
PPP3CBP16298 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.07■□□□□ 0.32
PPP3CBP16298 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PPP3CBP16298 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 MIR1238-201ENST00000408483 83 ntBASIC17.07■□□□□ 0.32
PPP3CBP16298 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.07■□□□□ 0.32
PPP3CBP16298 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.07■□□□□ 0.32
PPP3CBP16298 NAPSB-206ENST00000562112 1266 ntBASIC17.07■□□□□ 0.32
PPP3CBP16298 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.07■□□□□ 0.32
PPP3CBP16298 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PPP3CBP16298 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.07■□□□□ 0.32
PPP3CBP16298 AC145285.6-201ENST00000604632 637 ntBASIC17.07■□□□□ 0.32
PPP3CBP16298 AP000525.1-201ENST00000608286 694 ntBASIC17.07■□□□□ 0.32
PPP3CBP16298 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.07■□□□□ 0.32
PPP3CBP16298 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.07■□□□□ 0.32
PPP3CBP16298 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.07■□□□□ 0.32
PPP3CBP16298 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP3CBP16298 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PPP3CBP16298 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms