Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGN1P05114 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HMGN1P05114 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGN1P05114 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGN1P05114 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HMGN1P05114 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.28■□□□□ 0.36
HMGN1P05114 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGN1P05114 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGN1P05114 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGN1P05114 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.28■□□□□ 0.36
HMGN1P05114 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HMGN1P05114 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HMGN1P05114 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGN1P05114 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGN1P05114 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
HMGN1P05114 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGN1P05114 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HMGN1P05114 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGN1P05114 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HMGN1P05114 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGN1P05114 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN1P05114 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGN1P05114 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGN1P05114 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGN1P05114 AL162430.1-201ENST00000480705 870 ntBASIC17.27■□□□□ 0.36
HMGN1P05114 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.27■□□□□ 0.36
HMGN1P05114 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGN1P05114 AC022517.1-201ENST00000592429 346 ntBASIC17.27■□□□□ 0.36
HMGN1P05114 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGN1P05114 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGN1P05114 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.27■□□□□ 0.35
HMGN1P05114 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGN1P05114 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGN1P05114 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.27■□□□□ 0.35
HMGN1P05114 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGN1P05114 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HMGN1P05114 AC007613.1-201ENST00000572811 2597 ntBASIC17.27■□□□□ 0.35
HMGN1P05114 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HMGN1P05114 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
HMGN1P05114 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HMGN1P05114 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGN1P05114 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGN1P05114 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HMGN1P05114 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 TUBB8P6-201ENST00000436895 1288 ntBASIC17.26■□□□□ 0.35
HMGN1P05114 KRT18P16-201ENST00000510337 1294 ntBASIC17.26■□□□□ 0.35
HMGN1P05114 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGN1P05114 RARRES2P6-201ENST00000567333 442 ntBASIC17.26■□□□□ 0.35
HMGN1P05114 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.26■□□□□ 0.35
HMGN1P05114 AC080038.1-201ENST00000611274 1154 ntBASIC17.26■□□□□ 0.35
HMGN1P05114 MIR5787-201ENST00000611784 55 ntBASIC17.26■□□□□ 0.35
HMGN1P05114 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.26■□□□□ 0.35
HMGN1P05114 AC083906.6-201ENST00000641366 219 ntBASIC17.26■□□□□ 0.35
HMGN1P05114 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGN1P05114 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGN1P05114 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HMGN1P05114 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HMGN1P05114 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN1P05114 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HMGN1P05114 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms