Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
MYCNP04198 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.78■■□□□ 1.08
MYCNP04198 AL441883.1-201ENST00000566170 1045 ntBASIC21.78■■□□□ 1.08
MYCNP04198 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.78■■□□□ 1.08
MYCNP04198 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
MYCNP04198 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MYCNP04198 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.78■■□□□ 1.08
MYCNP04198 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MYCNP04198 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MYCNP04198 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MYCNP04198 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
MYCNP04198 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MYCNP04198 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
MYCNP04198 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MYCNP04198 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
MYCNP04198 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MYCNP04198 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.77■■□□□ 1.08
MYCNP04198 AC007952.6-201ENST00000573168 2673 ntBASIC21.77■■□□□ 1.08
MYCNP04198 AC003957.1-201ENST00000625108 2673 ntBASIC21.77■■□□□ 1.08
MYCNP04198 CASC19-229ENST00000641418 1373 ntBASIC21.77■■□□□ 1.08
MYCNP04198 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MYCNP04198 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MYCNP04198 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MYCNP04198 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MYCNP04198 AL450487.1-201ENST00000426799 995 ntBASIC21.77■■□□□ 1.08
MYCNP04198 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MYCNP04198 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MYCNP04198 AL353719.1-201ENST00000566847 864 ntBASIC21.77■■□□□ 1.08
MYCNP04198 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC21.77■■□□□ 1.08
MYCNP04198 AC005014.3-201ENST00000605985 190 ntBASIC21.77■■□□□ 1.08
MYCNP04198 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MYCNP04198 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.77■■□□□ 1.08
MYCNP04198 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MYCNP04198 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
MYCNP04198 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MYCNP04198 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
MYCNP04198 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
MYCNP04198 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MYCNP04198 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MYCNP04198 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MYCNP04198 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
MYCNP04198 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.76■■□□□ 1.07
MYCNP04198 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MYCNP04198 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.76■■□□□ 1.07
MYCNP04198 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC21.76■■□□□ 1.07
MYCNP04198 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MYCNP04198 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC21.76■■□□□ 1.07
MYCNP04198 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MYCNP04198 AL512604.3-201ENST00000569583 964 ntBASIC21.76■■□□□ 1.07
MYCNP04198 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MYCNP04198 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.76■■□□□ 1.07
MYCNP04198 AL023803.3-201ENST00000615559 522 ntBASIC21.76■■□□□ 1.07
MYCNP04198 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.76■■□□□ 1.07
MYCNP04198 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MYCNP04198 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.76■■□□□ 1.07
MYCNP04198 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.76■■□□□ 1.07
MYCNP04198 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
MYCNP04198 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
MYCNP04198 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC21.75■■□□□ 1.07
MYCNP04198 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.75■■□□□ 1.07
MYCNP04198 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
MYCNP04198 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC21.75■■□□□ 1.07
MYCNP04198 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.75■■□□□ 1.07
MYCNP04198 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.75■■□□□ 1.07
MYCNP04198 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MYCNP04198 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
MYCNP04198 AC005332.1-201ENST00000577698 1310 ntBASIC21.75■■□□□ 1.07
MYCNP04198 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MYCNP04198 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MYCNP04198 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MYCNP04198 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MYCNP04198 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MYCNP04198 KRT8P8-201ENST00000434750 1448 ntBASIC21.74■■□□□ 1.07
MYCNP04198 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.74■■□□□ 1.07
MYCNP04198 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MYCNP04198 AL137060.1-201ENST00000618151 2648 ntBASIC21.74■■□□□ 1.07
MYCNP04198 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.74■■□□□ 1.07
MYCNP04198 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
MYCNP04198 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MYCNP04198 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MYCNP04198 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MYCNP04198 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MYCNP04198 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC21.74■■□□□ 1.07
MYCNP04198 VENTXP5-201ENST00000523979 775 ntBASIC21.74■■□□□ 1.07
MYCNP04198 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC21.74■■□□□ 1.07
MYCNP04198 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.74■■□□□ 1.07
MYCNP04198 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MYCNP04198 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.74■■□□□ 1.07
MYCNP04198 CLEC4GP1-201ENST00000596555 870 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms