Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.83■□□□□ 0.45
OPN1SWP03999 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
OPN1SWP03999 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
OPN1SWP03999 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
OPN1SWP03999 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
OPN1SWP03999 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
OPN1SWP03999 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
OPN1SWP03999 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
OPN1SWP03999 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
OPN1SWP03999 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
OPN1SWP03999 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
OPN1SWP03999 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.83■□□□□ 0.44
OPN1SWP03999 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
OPN1SWP03999 TUBB8P6-201ENST00000436895 1288 ntBASIC17.83■□□□□ 0.44
OPN1SWP03999 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.83■□□□□ 0.44
OPN1SWP03999 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.83■□□□□ 0.44
OPN1SWP03999 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.83■□□□□ 0.44
OPN1SWP03999 AL138781.1-201ENST00000566567 1274 ntBASIC17.83■□□□□ 0.44
OPN1SWP03999 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.83■□□□□ 0.44
OPN1SWP03999 AC120498.8-201ENST00000614275 531 ntBASIC17.83■□□□□ 0.44
OPN1SWP03999 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
OPN1SWP03999 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.83■□□□□ 0.44
OPN1SWP03999 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
OPN1SWP03999 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
OPN1SWP03999 AC005082.1-201ENST00000413042 2259 ntBASIC17.83■□□□□ 0.44
OPN1SWP03999 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
OPN1SWP03999 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
OPN1SWP03999 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.83■□□□□ 0.44
OPN1SWP03999 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
OPN1SWP03999 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
OPN1SWP03999 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
OPN1SWP03999 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
OPN1SWP03999 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
OPN1SWP03999 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.83■□□□□ 0.44
OPN1SWP03999 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
OPN1SWP03999 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
OPN1SWP03999 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.82■□□□□ 0.44
OPN1SWP03999 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
OPN1SWP03999 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
OPN1SWP03999 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.82■□□□□ 0.44
OPN1SWP03999 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.82■□□□□ 0.44
OPN1SWP03999 AC093525.10-201ENST00000625130 1569 ntBASIC17.82■□□□□ 0.44
OPN1SWP03999 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.82■□□□□ 0.44
OPN1SWP03999 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
OPN1SWP03999 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
OPN1SWP03999 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPN1SWP03999 Z98044.1-201ENST00000632503 1764 ntBASIC17.81■□□□□ 0.44
OPN1SWP03999 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
OPN1SWP03999 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPN1SWP03999 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPN1SWP03999 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPN1SWP03999 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
OPN1SWP03999 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.81■□□□□ 0.44
OPN1SWP03999 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.81■□□□□ 0.44
OPN1SWP03999 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.81■□□□□ 0.44
OPN1SWP03999 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.81■□□□□ 0.44
OPN1SWP03999 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.81■□□□□ 0.44
OPN1SWP03999 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPN1SWP03999 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
OPN1SWP03999 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
OPN1SWP03999 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPN1SWP03999 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPN1SWP03999 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPN1SWP03999 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPN1SWP03999 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPN1SWP03999 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.8■□□□□ 0.44
OPN1SWP03999 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
OPN1SWP03999 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
OPN1SWP03999 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
OPN1SWP03999 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.8■□□□□ 0.44
OPN1SWP03999 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPN1SWP03999 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPN1SWP03999 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.8■□□□□ 0.44
OPN1SWP03999 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPN1SWP03999 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPN1SWP03999 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.8■□□□□ 0.44
OPN1SWP03999 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPN1SWP03999 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPN1SWP03999 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.8■□□□□ 0.44
OPN1SWP03999 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPN1SWP03999 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPN1SWP03999 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.8■□□□□ 0.44
OPN1SWP03999 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.8■□□□□ 0.44
OPN1SWP03999 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
OPN1SWP03999 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.8■□□□□ 0.44
OPN1SWP03999 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.8■□□□□ 0.44
OPN1SWP03999 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.8■□□□□ 0.44
OPN1SWP03999 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms