Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.54■□□□□ 0.88
HLA-DRAP01903 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HLA-DRAP01903 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DRAP01903 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DRAP01903 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DRAP01903 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DRAP01903 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HLA-DRAP01903 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.53■□□□□ 0.88
HLA-DRAP01903 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DRAP01903 RBM17P1-201ENST00000453646 1190 ntBASIC20.53■□□□□ 0.88
HLA-DRAP01903 CKBP1-201ENST00000565489 1086 ntBASIC20.53■□□□□ 0.88
HLA-DRAP01903 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.53■□□□□ 0.88
HLA-DRAP01903 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.53■□□□□ 0.88
HLA-DRAP01903 DGCR10-201ENST00000609839 495 ntBASIC20.53■□□□□ 0.88
HLA-DRAP01903 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.53■□□□□ 0.88
HLA-DRAP01903 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DRAP01903 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DRAP01903 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DRAP01903 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DRAP01903 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DRAP01903 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DRAP01903 KRT17P2-201ENST00000300992 1314 ntBASIC20.53■□□□□ 0.88
HLA-DRAP01903 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
HLA-DRAP01903 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DRAP01903 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DRAP01903 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DRAP01903 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DRAP01903 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DRAP01903 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 AL355075.4-201ENST00000554988 638 ntBASIC20.52■□□□□ 0.88
HLA-DRAP01903 SLC25A1P4-201ENST00000567977 778 ntBASIC20.52■□□□□ 0.88
HLA-DRAP01903 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DRAP01903 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DRAP01903 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HLA-DRAP01903 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HLA-DRAP01903 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.52■□□□□ 0.87
HLA-DRAP01903 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 AP000974.1-201ENST00000623909 2387 ntBASIC20.51■□□□□ 0.87
HLA-DRAP01903 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 TSPY15P-201ENST00000457163 923 ntBASIC20.51■□□□□ 0.87
HLA-DRAP01903 AC097488.1-201ENST00000507834 756 ntBASIC20.51■□□□□ 0.87
HLA-DRAP01903 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
HLA-DRAP01903 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRAP01903 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 AC096733.2-201ENST00000609937 1394 ntBASIC20.5■□□□□ 0.87
HLA-DRAP01903 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 AC018445.3-201ENST00000624177 1945 ntBASIC20.5■□□□□ 0.87
HLA-DRAP01903 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms