Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 NUDT16P1-203ENST00000513809 620 ntBASIC19.53■□□□□ 0.72
TOP3BO95985 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 AC010203.1-204ENST00000548782 407 ntBASIC19.53■□□□□ 0.72
TOP3BO95985 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.53■□□□□ 0.72
TOP3BO95985 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.53■□□□□ 0.72
TOP3BO95985 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.53■□□□□ 0.72
TOP3BO95985 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.53■□□□□ 0.72
TOP3BO95985 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.53■□□□□ 0.72
TOP3BO95985 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TOP3BO95985 AC120498.9-201ENST00000339021 3867 ntBASIC19.53■□□□□ 0.72
TOP3BO95985 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.53■□□□□ 0.72
TOP3BO95985 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.53■□□□□ 0.72
TOP3BO95985 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TOP3BO95985 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TOP3BO95985 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP3BO95985 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
TOP3BO95985 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.52■□□□□ 0.72
TOP3BO95985 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP3BO95985 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP3BO95985 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.52■□□□□ 0.72
TOP3BO95985 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP3BO95985 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TOP3BO95985 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TOP3BO95985 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP3BO95985 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP3BO95985 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.52■□□□□ 0.72
TOP3BO95985 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP3BO95985 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.52■□□□□ 0.72
TOP3BO95985 AC006011.2-201ENST00000621313 1158 ntBASIC19.52■□□□□ 0.72
TOP3BO95985 AL358472.4-201ENST00000633140 710 ntBASIC19.52■□□□□ 0.72
TOP3BO95985 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TOP3BO95985 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TOP3BO95985 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
TOP3BO95985 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TOP3BO95985 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TOP3BO95985 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP3BO95985 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TOP3BO95985 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TOP3BO95985 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TOP3BO95985 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TOP3BO95985 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TOP3BO95985 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TOP3BO95985 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP3BO95985 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TOP3BO95985 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.51■□□□□ 0.71
TOP3BO95985 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP3BO95985 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TOP3BO95985 AL390719.1-204ENST00000412397 1219 ntBASIC19.51■□□□□ 0.71
TOP3BO95985 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.51■□□□□ 0.71
TOP3BO95985 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP3BO95985 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.51■□□□□ 0.71
TOP3BO95985 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP3BO95985 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TOP3BO95985 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP3BO95985 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TOP3BO95985 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP3BO95985 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP3BO95985 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TOP3BO95985 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
TOP3BO95985 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.51■□□□□ 0.71
TOP3BO95985 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TOP3BO95985 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP3BO95985 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP3BO95985 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TOP3BO95985 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.51■□□□□ 0.71
TOP3BO95985 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.51■□□□□ 0.71
TOP3BO95985 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP3BO95985 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TOP3BO95985 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TOP3BO95985 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TOP3BO95985 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.5■□□□□ 0.71
TOP3BO95985 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP3BO95985 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP3BO95985 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP3BO95985 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP3BO95985 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP3BO95985 KRT16P5-201ENST00000455284 522 ntBASIC19.5■□□□□ 0.71
TOP3BO95985 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.5■□□□□ 0.71
TOP3BO95985 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.5■□□□□ 0.71
TOP3BO95985 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.5■□□□□ 0.71
TOP3BO95985 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
TOP3BO95985 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.5■□□□□ 0.71
TOP3BO95985 KRT126P-201ENST00000549467 1181 ntBASIC19.5■□□□□ 0.71
TOP3BO95985 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.5■□□□□ 0.71
TOP3BO95985 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
TOP3BO95985 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TOP3BO95985 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TOP3BO95985 AC073195.1-201ENST00000607241 877 ntBASIC19.5■□□□□ 0.71
TOP3BO95985 LINC01465-201ENST00000408887 1940 ntBASIC19.5■□□□□ 0.71
TOP3BO95985 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TOP3BO95985 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TOP3BO95985 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TOP3BO95985 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP3BO95985 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms