Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF1O95521 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF1O95521 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19■□□□□ 0.63
PRAMEF1O95521 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19■□□□□ 0.63
PRAMEF1O95521 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF1O95521 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19■□□□□ 0.63
PRAMEF1O95521 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PRAMEF1O95521 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF1O95521 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF1O95521 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF1O95521 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEF1O95521 FP475955.4-201ENST00000623131 1990 ntBASIC18.99■□□□□ 0.63
PRAMEF1O95521 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEF1O95521 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF1O95521 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF1O95521 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEF1O95521 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEF1O95521 PRSS44-201ENST00000515154 1146 ntBASIC18.99■□□□□ 0.63
PRAMEF1O95521 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEF1O95521 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PRAMEF1O95521 AP000692.2-201ENST00000608391 879 ntBASIC18.99■□□□□ 0.63
PRAMEF1O95521 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF1O95521 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF1O95521 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF1O95521 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF1O95521 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF1O95521 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF1O95521 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF1O95521 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.98■□□□□ 0.63
PRAMEF1O95521 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 AL049812.1-201ENST00000432563 2267 ntBASIC18.98■□□□□ 0.63
PRAMEF1O95521 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.98■□□□□ 0.63
PRAMEF1O95521 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF1O95521 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF1O95521 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF1O95521 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF1O95521 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF1O95521 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF1O95521 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 KRT17P2-201ENST00000300992 1314 ntBASIC18.98■□□□□ 0.63
PRAMEF1O95521 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF1O95521 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF1O95521 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 FEM1AP3-201ENST00000403722 1741 ntBASIC18.97■□□□□ 0.63
PRAMEF1O95521 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 AL596275.1-201ENST00000423464 877 ntBASIC18.97■□□□□ 0.63
PRAMEF1O95521 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF1O95521 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.97■□□□□ 0.63
PRAMEF1O95521 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF1O95521 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF1O95521 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.96■□□□□ 0.63
PRAMEF1O95521 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF1O95521 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF1O95521 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.96■□□□□ 0.63
PRAMEF1O95521 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF1O95521 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.96■□□□□ 0.63
PRAMEF1O95521 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF1O95521 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF1O95521 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF1O95521 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms