Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.1■□□□□ 0.81
RTN3O95197 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN3O95197 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN3O95197 TSPY17P-201ENST00000450329 467 ntBASIC20.1■□□□□ 0.81
RTN3O95197 ECEL1P2-202ENST00000465689 757 ntBASIC20.1■□□□□ 0.81
RTN3O95197 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.1■□□□□ 0.81
RTN3O95197 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
RTN3O95197 SDHAP1-207ENST00000440850 2000 ntBASIC20.1■□□□□ 0.81
RTN3O95197 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.1■□□□□ 0.81
RTN3O95197 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.1■□□□□ 0.81
RTN3O95197 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN3O95197 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN3O95197 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.09■□□□□ 0.81
RTN3O95197 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTN3O95197 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN3O95197 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTN3O95197 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.09■□□□□ 0.81
RTN3O95197 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN3O95197 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTN3O95197 AL137013.1-201ENST00000432946 1228 ntBASIC20.09■□□□□ 0.81
RTN3O95197 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTN3O95197 AC010653.2-201ENST00000623505 997 ntBASIC20.09■□□□□ 0.81
RTN3O95197 AC092865.7-201ENST00000641832 219 ntBASIC20.09■□□□□ 0.81
RTN3O95197 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.09■□□□□ 0.81
RTN3O95197 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN3O95197 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.09■□□□□ 0.81
RTN3O95197 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.09■□□□□ 0.81
RTN3O95197 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN3O95197 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.09■□□□□ 0.81
RTN3O95197 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.09■□□□□ 0.81
RTN3O95197 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.09■□□□□ 0.81
RTN3O95197 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN3O95197 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RTN3O95197 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RTN3O95197 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN3O95197 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RTN3O95197 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.09■□□□□ 0.81
RTN3O95197 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RTN3O95197 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN3O95197 AC125437.2-201ENST00000625180 2167 ntBASIC20.08■□□□□ 0.81
RTN3O95197 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RTN3O95197 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RTN3O95197 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN3O95197 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN3O95197 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN3O95197 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN3O95197 AC005521.1-201ENST00000393351 872 ntBASIC20.08■□□□□ 0.81
RTN3O95197 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
RTN3O95197 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.08■□□□□ 0.81
RTN3O95197 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.08■□□□□ 0.81
RTN3O95197 AL023803.3-201ENST00000615559 522 ntBASIC20.08■□□□□ 0.81
RTN3O95197 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RTN3O95197 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN3O95197 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.08■□□□□ 0.8
RTN3O95197 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RTN3O95197 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
RTN3O95197 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN3O95197 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN3O95197 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN3O95197 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN3O95197 PCDHAC2-203ENST00000615316 3011 ntBASIC20.07■□□□□ 0.8
RTN3O95197 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN3O95197 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN3O95197 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN3O95197 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN3O95197 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RTN3O95197 HMGA1P5-201ENST00000412453 271 ntBASIC20.07■□□□□ 0.8
RTN3O95197 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN3O95197 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RTN3O95197 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN3O95197 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.07■□□□□ 0.8
RTN3O95197 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN3O95197 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RTN3O95197 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN3O95197 FAM87A-204ENST00000613235 858 ntBASIC20.07■□□□□ 0.8
RTN3O95197 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN3O95197 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN3O95197 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN3O95197 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN3O95197 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN3O95197 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN3O95197 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.06■□□□□ 0.8
RTN3O95197 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.06■□□□□ 0.8
RTN3O95197 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN3O95197 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN3O95197 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.06■□□□□ 0.8
RTN3O95197 AIRN-201ENST00000601203 4374 ntBASIC20.06■□□□□ 0.8
RTN3O95197 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN3O95197 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RTN3O95197 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN3O95197 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN3O95197 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN3O95197 TERF1P1-201ENST00000311003 1181 ntBASIC20.06■□□□□ 0.8
RTN3O95197 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN3O95197 INGX-201ENST00000359239 846 ntBASIC20.06■□□□□ 0.8
RTN3O95197 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN3O95197 TMPOP1-202ENST00000424642 1267 ntBASIC20.06■□□□□ 0.8
RTN3O95197 LIN28AP1-201ENST00000429574 405 ntBASIC20.06■□□□□ 0.8
RTN3O95197 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.06■□□□□ 0.8
RTN3O95197 AC007663.1-201ENST00000438948 1240 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms