Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UPK1BO75841 TSPY13P-201ENST00000338964 914 ntBASIC16.65■□□□□ 0.26
UPK1BO75841 AC007322.3-201ENST00000426526 701 ntBASIC16.65■□□□□ 0.26
UPK1BO75841 TSPY9P-201ENST00000440215 945 ntBASIC16.65■□□□□ 0.26
UPK1BO75841 TSPY11P-201ENST00000442607 1045 ntBASIC16.65■□□□□ 0.26
UPK1BO75841 NTF6A-201ENST00000591175 560 ntBASIC16.65■□□□□ 0.26
UPK1BO75841 MIR4787-201ENST00000607364 84 ntBASIC16.65■□□□□ 0.26
UPK1BO75841 PHGDH-210ENST00000641115 1638 ntBASIC16.65■□□□□ 0.26
UPK1BO75841 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1BO75841 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1BO75841 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
UPK1BO75841 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UPK1BO75841 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1BO75841 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1BO75841 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
UPK1BO75841 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UPK1BO75841 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK1BO75841 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.65■□□□□ 0.26
UPK1BO75841 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1BO75841 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
UPK1BO75841 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UPK1BO75841 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 OR6D1P-202ENST00000641007 5290 ntBASIC16.64■□□□□ 0.25
UPK1BO75841 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK1BO75841 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
UPK1BO75841 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK1BO75841 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UPK1BO75841 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK1BO75841 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
UPK1BO75841 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK1BO75841 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK1BO75841 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1BO75841 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UPK1BO75841 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.63■□□□□ 0.25
UPK1BO75841 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
UPK1BO75841 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
UPK1BO75841 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
UPK1BO75841 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UPK1BO75841 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.63■□□□□ 0.25
UPK1BO75841 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.63■□□□□ 0.25
UPK1BO75841 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.63■□□□□ 0.25
UPK1BO75841 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.63■□□□□ 0.25
UPK1BO75841 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.63■□□□□ 0.25
UPK1BO75841 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.63■□□□□ 0.25
UPK1BO75841 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.63■□□□□ 0.25
UPK1BO75841 AL031963.3-201ENST00000606441 850 ntBASIC16.63■□□□□ 0.25
UPK1BO75841 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
UPK1BO75841 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.63■□□□□ 0.25
UPK1BO75841 AC083906.6-201ENST00000641366 219 ntBASIC16.63■□□□□ 0.25
UPK1BO75841 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
UPK1BO75841 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.63■□□□□ 0.25
UPK1BO75841 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UPK1BO75841 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.63■□□□□ 0.25
UPK1BO75841 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
UPK1BO75841 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.63■□□□□ 0.25
UPK1BO75841 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1BO75841 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK1BO75841 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.62■□□□□ 0.25
UPK1BO75841 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.62■□□□□ 0.25
UPK1BO75841 AC022211.2-201ENST00000585075 2527 ntBASIC16.62■□□□□ 0.25
UPK1BO75841 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK1BO75841 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK1BO75841 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
UPK1BO75841 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.62■□□□□ 0.25
UPK1BO75841 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms