Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CACNA1FO60840 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CACNA1FO60840 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC24.04■■□□□ 1.44
CACNA1FO60840 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC24.04■■□□□ 1.44
CACNA1FO60840 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CACNA1FO60840 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC24.04■■□□□ 1.44
CACNA1FO60840 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CACNA1FO60840 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC24.04■■□□□ 1.44
CACNA1FO60840 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CACNA1FO60840 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CACNA1FO60840 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC24.03■■□□□ 1.44
CACNA1FO60840 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CACNA1FO60840 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CACNA1FO60840 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC24.03■■□□□ 1.44
CACNA1FO60840 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CACNA1FO60840 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CACNA1FO60840 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CACNA1FO60840 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.03■■□□□ 1.44
CACNA1FO60840 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC24.03■■□□□ 1.44
CACNA1FO60840 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CACNA1FO60840 AC141257.4-201ENST00000634557 245 ntBASIC24.03■■□□□ 1.44
CACNA1FO60840 AC136944.6-201ENST00000634818 245 ntBASIC24.03■■□□□ 1.44
CACNA1FO60840 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CACNA1FO60840 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CACNA1FO60840 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CACNA1FO60840 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.03■■□□□ 1.44
CACNA1FO60840 AL049812.1-201ENST00000432563 2267 ntBASIC24.03■■□□□ 1.44
CACNA1FO60840 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CACNA1FO60840 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CACNA1FO60840 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CACNA1FO60840 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CACNA1FO60840 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CACNA1FO60840 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
CACNA1FO60840 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC24.02■■□□□ 1.44
CACNA1FO60840 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CACNA1FO60840 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC24.02■■□□□ 1.44
CACNA1FO60840 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CACNA1FO60840 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CACNA1FO60840 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CACNA1FO60840 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CACNA1FO60840 NT5C-210ENST00000582160 860 ntTSL 2 BASIC24.02■■□□□ 1.44
CACNA1FO60840 MIR3180-5-201ENST00000583743 153 ntBASIC24.02■■□□□ 1.44
CACNA1FO60840 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CACNA1FO60840 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.02■■□□□ 1.44
CACNA1FO60840 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CACNA1FO60840 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CACNA1FO60840 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.02■■□□□ 1.44
CACNA1FO60840 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CACNA1FO60840 AK4P3-201ENST00000418260 669 ntBASIC24.02■■□□□ 1.43
CACNA1FO60840 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.02■■□□□ 1.43
CACNA1FO60840 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
CACNA1FO60840 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CACNA1FO60840 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC24.01■■□□□ 1.43
CACNA1FO60840 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CACNA1FO60840 HOXB1-202ENST00000577092 1414 ntBASIC24.01■■□□□ 1.43
CACNA1FO60840 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CACNA1FO60840 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.01■■□□□ 1.43
CACNA1FO60840 AL359075.1-203ENST00000462729 1002 ntBASIC24.01■■□□□ 1.43
CACNA1FO60840 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.01■■□□□ 1.43
CACNA1FO60840 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CACNA1FO60840 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC24.01■■□□□ 1.43
CACNA1FO60840 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CACNA1FO60840 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CACNA1FO60840 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CACNA1FO60840 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.01■■□□□ 1.43
CACNA1FO60840 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.01■■□□□ 1.43
CACNA1FO60840 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24■■□□□ 1.43
CACNA1FO60840 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24■■□□□ 1.43
CACNA1FO60840 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24■■□□□ 1.43
CACNA1FO60840 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24■■□□□ 1.43
CACNA1FO60840 AC010203.1-204ENST00000548782 407 ntBASIC24■■□□□ 1.43
CACNA1FO60840 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CACNA1FO60840 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC24■■□□□ 1.43
CACNA1FO60840 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CACNA1FO60840 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CACNA1FO60840 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CACNA1FO60840 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24■■□□□ 1.43
CACNA1FO60840 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24■■□□□ 1.43
CACNA1FO60840 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CACNA1FO60840 NFYC-AS1-201ENST00000606277 1687 ntBASIC24■■□□□ 1.43
CACNA1FO60840 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CACNA1FO60840 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CACNA1FO60840 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CACNA1FO60840 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CACNA1FO60840 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.99■■□□□ 1.43
CACNA1FO60840 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CACNA1FO60840 AC117947.1-201ENST00000427448 529 ntBASIC23.99■■□□□ 1.43
CACNA1FO60840 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.99■■□□□ 1.43
CACNA1FO60840 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.99■■□□□ 1.43
CACNA1FO60840 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CACNA1FO60840 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CACNA1FO60840 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.99■■□□□ 1.43
CACNA1FO60840 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CACNA1FO60840 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CACNA1FO60840 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CACNA1FO60840 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CACNA1FO60840 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.98■■□□□ 1.43
CACNA1FO60840 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CACNA1FO60840 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CACNA1FO60840 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms