Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZIC3O60481 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.19■□□□□ 0.34
ZIC3O60481 FAM87A-204ENST00000613235 858 ntBASIC17.19■□□□□ 0.34
ZIC3O60481 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZIC3O60481 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZIC3O60481 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZIC3O60481 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
ZIC3O60481 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.19■□□□□ 0.34
ZIC3O60481 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.19■□□□□ 0.34
ZIC3O60481 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZIC3O60481 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.19■□□□□ 0.34
ZIC3O60481 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ZIC3O60481 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.19■□□□□ 0.34
ZIC3O60481 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZIC3O60481 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.19■□□□□ 0.34
ZIC3O60481 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ZIC3O60481 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.19■□□□□ 0.34
ZIC3O60481 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZIC3O60481 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZIC3O60481 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZIC3O60481 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.18■□□□□ 0.34
ZIC3O60481 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZIC3O60481 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.18■□□□□ 0.34
ZIC3O60481 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.18■□□□□ 0.34
ZIC3O60481 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZIC3O60481 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.18■□□□□ 0.34
ZIC3O60481 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.18■□□□□ 0.34
ZIC3O60481 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.18■□□□□ 0.34
ZIC3O60481 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ZIC3O60481 AC005363.2-201ENST00000618631 242 ntBASIC17.18■□□□□ 0.34
ZIC3O60481 AC010653.2-201ENST00000623505 997 ntBASIC17.18■□□□□ 0.34
ZIC3O60481 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.18■□□□□ 0.34
ZIC3O60481 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZIC3O60481 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZIC3O60481 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZIC3O60481 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.18■□□□□ 0.34
ZIC3O60481 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZIC3O60481 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
ZIC3O60481 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.18■□□□□ 0.34
ZIC3O60481 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ZIC3O60481 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ZIC3O60481 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.17■□□□□ 0.34
ZIC3O60481 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.17■□□□□ 0.34
ZIC3O60481 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ZIC3O60481 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ZIC3O60481 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.17■□□□□ 0.34
ZIC3O60481 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.17■□□□□ 0.34
ZIC3O60481 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ZIC3O60481 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZIC3O60481 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.17■□□□□ 0.34
ZIC3O60481 FP475955.4-201ENST00000623131 1990 ntBASIC17.17■□□□□ 0.34
ZIC3O60481 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZIC3O60481 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZIC3O60481 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ZIC3O60481 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZIC3O60481 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.16■□□□□ 0.34
ZIC3O60481 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.16■□□□□ 0.34
ZIC3O60481 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.16■□□□□ 0.34
ZIC3O60481 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.16■□□□□ 0.34
ZIC3O60481 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZIC3O60481 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.16■□□□□ 0.34
ZIC3O60481 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ZIC3O60481 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.16■□□□□ 0.34
ZIC3O60481 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZIC3O60481 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZIC3O60481 SLC25A3P1-201ENST00000443844 931 ntBASIC17.16■□□□□ 0.34
ZIC3O60481 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.16■□□□□ 0.34
ZIC3O60481 AP003041.3-201ENST00000527151 707 ntBASIC17.16■□□□□ 0.34
ZIC3O60481 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
ZIC3O60481 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.16■□□□□ 0.34
ZIC3O60481 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.16■□□□□ 0.34
ZIC3O60481 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZIC3O60481 AC008622.2-201ENST00000617006 1229 ntBASIC17.16■□□□□ 0.34
ZIC3O60481 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZIC3O60481 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.16■□□□□ 0.34
ZIC3O60481 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.16■□□□□ 0.34
ZIC3O60481 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZIC3O60481 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZIC3O60481 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZIC3O60481 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZIC3O60481 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZIC3O60481 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.15■□□□□ 0.34
ZIC3O60481 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.15■□□□□ 0.34
ZIC3O60481 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.15■□□□□ 0.34
ZIC3O60481 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ZIC3O60481 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms