Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC008622.2-201ENST00000617006 1229 ntBASIC18.91■□□□□ 0.62
PCDHGA12O60330 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
PCDHGA12O60330 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHGA12O60330 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
PCDHGA12O60330 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGA12O60330 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGA12O60330 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA12O60330 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA12O60330 IER3-202ENST00000376377 1350 ntBASIC18.91■□□□□ 0.62
PCDHGA12O60330 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA12O60330 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA12O60330 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGA12O60330 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 AL020996.1-203ENST00000536896 2307 ntBASIC18.9■□□□□ 0.62
PCDHGA12O60330 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA12O60330 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGA12O60330 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
PCDHGA12O60330 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHGA12O60330 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA12O60330 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA12O60330 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA12O60330 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA12O60330 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA12O60330 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA12O60330 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHGA12O60330 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA12O60330 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA12O60330 KRT18P48-201ENST00000434763 852 ntBASIC18.89■□□□□ 0.61
PCDHGA12O60330 AL671277.2-201ENST00000458060 996 ntBASIC18.89■□□□□ 0.61
PCDHGA12O60330 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA12O60330 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHGA12O60330 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.89■□□□□ 0.61
PCDHGA12O60330 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.89■□□□□ 0.61
PCDHGA12O60330 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA12O60330 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHGA12O60330 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA12O60330 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHGA12O60330 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA12O60330 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA12O60330 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 CKBP1-201ENST00000565489 1086 ntBASIC18.88■□□□□ 0.61
PCDHGA12O60330 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHGA12O60330 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA12O60330 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDHGA12O60330 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms