Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 TSPY21P-201ENST00000433481 731 ntBASIC18.23■□□□□ 0.51
PCDH7O60245 AC128676.1-201ENST00000454392 318 ntBASIC18.23■□□□□ 0.51
PCDH7O60245 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDH7O60245 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH7O60245 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDH7O60245 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDH7O60245 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH7O60245 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH7O60245 POU5F1P3-201ENST00000428824 1078 ntBASIC18.22■□□□□ 0.51
PCDH7O60245 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDH7O60245 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH7O60245 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PCDH7O60245 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH7O60245 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH7O60245 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH7O60245 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDH7O60245 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
PCDH7O60245 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDH7O60245 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH7O60245 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH7O60245 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH7O60245 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDH7O60245 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDH7O60245 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDH7O60245 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH7O60245 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.21■□□□□ 0.5
PCDH7O60245 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDH7O60245 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH7O60245 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH7O60245 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDH7O60245 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH7O60245 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDH7O60245 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH7O60245 C1QBPP2-201ENST00000528754 825 ntBASIC18.2■□□□□ 0.5
PCDH7O60245 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH7O60245 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PCDH7O60245 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH7O60245 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH7O60245 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH7O60245 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH7O60245 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
PCDH7O60245 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDH7O60245 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH7O60245 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.19■□□□□ 0.5
PCDH7O60245 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms