Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.14■□□□□ 0.81
CAPN9O14815 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN9O14815 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.14■□□□□ 0.81
CAPN9O14815 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.14■□□□□ 0.81
CAPN9O14815 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.14■□□□□ 0.81
CAPN9O14815 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.14■□□□□ 0.81
CAPN9O14815 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.14■□□□□ 0.81
CAPN9O14815 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.14■□□□□ 0.81
CAPN9O14815 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN9O14815 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN9O14815 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN9O14815 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN9O14815 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN9O14815 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CAPN9O14815 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CAPN9O14815 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.13■□□□□ 0.81
CAPN9O14815 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.13■□□□□ 0.81
CAPN9O14815 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.13■□□□□ 0.81
CAPN9O14815 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.13■□□□□ 0.81
CAPN9O14815 AC098818.2-201ENST00000564925 2320 ntBASIC20.13■□□□□ 0.81
CAPN9O14815 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CAPN9O14815 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.13■□□□□ 0.81
CAPN9O14815 Z85996.1-201ENST00000494644 937 ntBASIC20.13■□□□□ 0.81
CAPN9O14815 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 AP003071.4-201ENST00000562276 1284 ntBASIC20.13■□□□□ 0.81
CAPN9O14815 MIR6786-201ENST00000616843 113 ntBASIC20.13■□□□□ 0.81
CAPN9O14815 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.13■□□□□ 0.81
CAPN9O14815 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CAPN9O14815 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.13■□□□□ 0.81
CAPN9O14815 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.13■□□□□ 0.81
CAPN9O14815 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN9O14815 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CAPN9O14815 RCC2P6-201ENST00000526625 1557 ntBASIC20.12■□□□□ 0.81
CAPN9O14815 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CAPN9O14815 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.12■□□□□ 0.81
CAPN9O14815 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
CAPN9O14815 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CAPN9O14815 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.12■□□□□ 0.81
CAPN9O14815 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.12■□□□□ 0.81
CAPN9O14815 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 AC004951.3-201ENST00000418645 1148 ntBASIC20.12■□□□□ 0.81
CAPN9O14815 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.12■□□□□ 0.81
CAPN9O14815 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.12■□□□□ 0.81
CAPN9O14815 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CAPN9O14815 AC011298.2-201ENST00000617989 482 ntBASIC20.12■□□□□ 0.81
CAPN9O14815 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CAPN9O14815 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN9O14815 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.12■□□□□ 0.81
CAPN9O14815 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 BX323043.1-201ENST00000641006 1765 ntBASIC20.11■□□□□ 0.81
CAPN9O14815 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CAPN9O14815 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
CAPN9O14815 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 B3GAT3P1-201ENST00000471720 806 ntBASIC20.11■□□□□ 0.81
CAPN9O14815 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.11■□□□□ 0.81
CAPN9O14815 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.11■□□□□ 0.81
CAPN9O14815 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.11■□□□□ 0.81
CAPN9O14815 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CAPN9O14815 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CAPN9O14815 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.11■□□□□ 0.81
CAPN9O14815 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN9O14815 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.1■□□□□ 0.81
CAPN9O14815 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CAPN9O14815 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CAPN9O14815 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms