Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
CHD1O14646 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CHD1O14646 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC30.95■■■□□ 2.55
CHD1O14646 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
CHD1O14646 MCCD1P1-208ENST00000445732 328 ntBASIC30.95■■■□□ 2.55
CHD1O14646 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC30.95■■■□□ 2.55
CHD1O14646 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC30.95■■■□□ 2.55
CHD1O14646 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC30.95■■■□□ 2.55
CHD1O14646 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
CHD1O14646 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
CHD1O14646 AC006128.1-201ENST00000624704 1661 ntBASIC30.95■■■□□ 2.55
CHD1O14646 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC30.95■■■□□ 2.55
CHD1O14646 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.54
CHD1O14646 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC30.95■■■□□ 2.54
CHD1O14646 HES2-202ENST00000377836 507 ntTSL 2 BASIC30.95■■■□□ 2.54
CHD1O14646 MIR940-201ENST00000401276 94 ntBASIC30.95■■■□□ 2.54
CHD1O14646 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC30.95■■■□□ 2.54
CHD1O14646 VENTXP7-201ENST00000475503 772 ntBASIC30.95■■■□□ 2.54
CHD1O14646 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC30.95■■■□□ 2.54
CHD1O14646 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CHD1O14646 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CHD1O14646 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
CHD1O14646 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
CHD1O14646 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CHD1O14646 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
CHD1O14646 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CHD1O14646 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
CHD1O14646 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CHD1O14646 HNRNPA1P28-201ENST00000424481 961 ntBASIC30.94■■■□□ 2.54
CHD1O14646 AP003733.1-201ENST00000491725 852 ntBASIC30.94■■■□□ 2.54
CHD1O14646 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CHD1O14646 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC30.94■■■□□ 2.54
CHD1O14646 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
CHD1O14646 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC30.94■■■□□ 2.54
CHD1O14646 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CHD1O14646 AC007225.1-201ENST00000566331 1836 ntBASIC30.94■■■□□ 2.54
CHD1O14646 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CHD1O14646 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CHD1O14646 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHD1O14646 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC30.93■■■□□ 2.54
CHD1O14646 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC30.93■■■□□ 2.54
CHD1O14646 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC30.93■■■□□ 2.54
CHD1O14646 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CHD1O14646 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CHD1O14646 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC30.93■■■□□ 2.54
CHD1O14646 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC30.93■■■□□ 2.54
CHD1O14646 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC30.93■■■□□ 2.54
CHD1O14646 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC30.93■■■□□ 2.54
CHD1O14646 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC30.93■■■□□ 2.54
CHD1O14646 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHD1O14646 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHD1O14646 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHD1O14646 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHD1O14646 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHD1O14646 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHD1O14646 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC30.92■■■□□ 2.54
CHD1O14646 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC30.92■■■□□ 2.54
CHD1O14646 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHD1O14646 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC30.92■■■□□ 2.54
CHD1O14646 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC30.92■■■□□ 2.54
CHD1O14646 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHD1O14646 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
CHD1O14646 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC30.92■■■□□ 2.54
CHD1O14646 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CHD1O14646 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHD1O14646 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHD1O14646 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHD1O14646 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
CHD1O14646 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC30.91■■■□□ 2.54
CHD1O14646 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHD1O14646 AC233723.2-201ENST00000623798 2106 ntBASIC30.91■■■□□ 2.54
CHD1O14646 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC30.91■■■□□ 2.54
CHD1O14646 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
CHD1O14646 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC30.9■■■□□ 2.54
CHD1O14646 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC30.9■■■□□ 2.54
CHD1O14646 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CHD1O14646 YBX2P1-201ENST00000394192 760 ntBASIC30.9■■■□□ 2.54
CHD1O14646 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
CHD1O14646 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CHD1O14646 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC30.9■■■□□ 2.54
CHD1O14646 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC30.9■■■□□ 2.54
CHD1O14646 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CHD1O14646 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CHD1O14646 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC30.9■■■□□ 2.54
CHD1O14646 AC010240.3-201ENST00000607688 395 ntBASIC30.9■■■□□ 2.54
CHD1O14646 PRKN-208ENST00000610470 531 ntTSL 2 BASIC30.9■■■□□ 2.54
CHD1O14646 PRKN-209ENST00000612485 225 ntTSL 5 BASIC30.9■■■□□ 2.54
CHD1O14646 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CHD1O14646 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC30.89■■■□□ 2.54
CHD1O14646 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CHD1O14646 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
CHD1O14646 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CHD1O14646 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC30.89■■■□□ 2.54
CHD1O14646 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CHD1O14646 AC093909.1-201ENST00000504731 1122 ntBASIC30.89■■■□□ 2.54
CHD1O14646 AC005332.3-201ENST00000589904 676 ntBASIC30.89■■■□□ 2.54
CHD1O14646 AC124864.1-201ENST00000623408 392 ntBASIC30.89■■■□□ 2.54
CHD1O14646 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC30.89■■■□□ 2.54
CHD1O14646 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC30.89■■■□□ 2.54
CHD1O14646 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms