Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.54■□□□□ 0.56
UBFD1O14562 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.54■□□□□ 0.56
UBFD1O14562 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.53■□□□□ 0.56
UBFD1O14562 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UBFD1O14562 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.53■□□□□ 0.56
UBFD1O14562 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.53■□□□□ 0.56
UBFD1O14562 AL390961.4-201ENST00000623958 2535 ntBASIC18.53■□□□□ 0.56
UBFD1O14562 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.53■□□□□ 0.56
UBFD1O14562 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 UNC93B5-201ENST00000530315 699 ntBASIC18.53■□□□□ 0.56
UBFD1O14562 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.53■□□□□ 0.56
UBFD1O14562 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.53■□□□□ 0.56
UBFD1O14562 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.53■□□□□ 0.56
UBFD1O14562 AC083906.6-201ENST00000641366 219 ntBASIC18.53■□□□□ 0.56
UBFD1O14562 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.53■□□□□ 0.56
UBFD1O14562 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.53■□□□□ 0.56
UBFD1O14562 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.53■□□□□ 0.56
UBFD1O14562 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBFD1O14562 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.53■□□□□ 0.56
UBFD1O14562 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
UBFD1O14562 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.52■□□□□ 0.56
UBFD1O14562 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.52■□□□□ 0.56
UBFD1O14562 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
UBFD1O14562 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.52■□□□□ 0.56
UBFD1O14562 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBFD1O14562 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.52■□□□□ 0.56
UBFD1O14562 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UBFD1O14562 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBFD1O14562 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
UBFD1O14562 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBFD1O14562 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBFD1O14562 BICD1-207ENST00000551848 1962 ntBASIC18.52■□□□□ 0.56
UBFD1O14562 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBFD1O14562 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBFD1O14562 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBFD1O14562 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBFD1O14562 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.52■□□□□ 0.56
UBFD1O14562 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UBFD1O14562 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.52■□□□□ 0.56
UBFD1O14562 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.52■□□□□ 0.56
UBFD1O14562 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
UBFD1O14562 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.52■□□□□ 0.56
UBFD1O14562 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.52■□□□□ 0.55
UBFD1O14562 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBFD1O14562 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBFD1O14562 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBFD1O14562 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBFD1O14562 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.52■□□□□ 0.55
UBFD1O14562 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
UBFD1O14562 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBFD1O14562 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
UBFD1O14562 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
UBFD1O14562 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
UBFD1O14562 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
UBFD1O14562 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UBFD1O14562 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.51■□□□□ 0.55
UBFD1O14562 TSPY23P-201ENST00000440136 739 ntBASIC18.51■□□□□ 0.55
UBFD1O14562 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.51■□□□□ 0.55
UBFD1O14562 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.51■□□□□ 0.55
UBFD1O14562 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 C1QL1P1-201ENST00000568105 661 ntBASIC18.51■□□□□ 0.55
UBFD1O14562 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.51■□□□□ 0.55
UBFD1O14562 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
UBFD1O14562 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.51■□□□□ 0.55
UBFD1O14562 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBFD1O14562 NBPF21P-201ENST00000425093 1451 ntBASIC18.51■□□□□ 0.55
UBFD1O14562 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
UBFD1O14562 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.51■□□□□ 0.55
UBFD1O14562 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.5■□□□□ 0.55
UBFD1O14562 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UBFD1O14562 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms