Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.99■□□□□ 0.47
CLDN4O14493 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLDN4O14493 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN4O14493 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLDN4O14493 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN4O14493 CRYGFP-201ENST00000418459 633 ntBASIC17.98■□□□□ 0.47
CLDN4O14493 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN4O14493 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN4O14493 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN4O14493 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN4O14493 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN4O14493 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CLDN4O14493 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN4O14493 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLDN4O14493 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN4O14493 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN4O14493 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN4O14493 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN4O14493 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLDN4O14493 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN4O14493 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN4O14493 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN4O14493 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN4O14493 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CLDN4O14493 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN4O14493 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN4O14493 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN4O14493 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN4O14493 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN4O14493 AP000525.1-201ENST00000608286 694 ntBASIC17.97■□□□□ 0.47
CLDN4O14493 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN4O14493 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
CLDN4O14493 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN4O14493 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN4O14493 KRT8P11-201ENST00000409686 1436 ntBASIC17.97■□□□□ 0.47
CLDN4O14493 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN4O14493 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN4O14493 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN4O14493 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN4O14493 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLDN4O14493 AC005332.7-201ENST00000614046 2005 ntBASIC17.96■□□□□ 0.47
CLDN4O14493 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CLDN4O14493 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLDN4O14493 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN4O14493 AC141586.3-201ENST00000562166 1838 ntBASIC17.96■□□□□ 0.47
CLDN4O14493 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLDN4O14493 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CLDN4O14493 AC096733.2-201ENST00000609937 1394 ntBASIC17.96■□□□□ 0.47
CLDN4O14493 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CLDN4O14493 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CLDN4O14493 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN4O14493 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN4O14493 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN4O14493 MIR1238-201ENST00000408483 83 ntBASIC17.96■□□□□ 0.47
CLDN4O14493 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN4O14493 TSPY23P-201ENST00000440136 739 ntBASIC17.96■□□□□ 0.47
CLDN4O14493 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN4O14493 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLDN4O14493 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN4O14493 CKBP1-201ENST00000565489 1086 ntBASIC17.96■□□□□ 0.47
CLDN4O14493 AP005242.2-201ENST00000580065 1175 ntBASIC17.96■□□□□ 0.47
CLDN4O14493 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN4O14493 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN4O14493 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN4O14493 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN4O14493 AC116562.4-201ENST00000641316 2276 ntBASIC17.96■□□□□ 0.47
CLDN4O14493 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.96■□□□□ 0.46
CLDN4O14493 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 AC079598.2-202ENST00000546624 1451 ntBASIC17.95■□□□□ 0.46
CLDN4O14493 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN4O14493 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN4O14493 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN4O14493 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CLDN4O14493 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 MMP23A-201ENST00000234610 1017 ntBASIC17.95■□□□□ 0.46
CLDN4O14493 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms