Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 AP000974.1-201ENST00000623909 2387 ntBASIC14.66□□□□□ -0.06
NDUFA4O00483 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.66□□□□□ -0.06
NDUFA4O00483 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.65□□□□□ -0.06
NDUFA4O00483 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.65□□□□□ -0.06
NDUFA4O00483 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.65□□□□□ -0.06
NDUFA4O00483 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NDUFA4O00483 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.65□□□□□ -0.06
NDUFA4O00483 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.65□□□□□ -0.06
NDUFA4O00483 AC012618.2-201ENST00000428058 849 ntBASIC14.65□□□□□ -0.06
NDUFA4O00483 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.65□□□□□ -0.06
NDUFA4O00483 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.65□□□□□ -0.06
NDUFA4O00483 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.65□□□□□ -0.06
NDUFA4O00483 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.65□□□□□ -0.06
NDUFA4O00483 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA4O00483 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.65□□□□□ -0.06
NDUFA4O00483 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NDUFA4O00483 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NDUFA4O00483 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
NDUFA4O00483 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 RCC2P6-201ENST00000526625 1557 ntBASIC14.64□□□□□ -0.07
NDUFA4O00483 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFA4O00483 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
NDUFA4O00483 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.64□□□□□ -0.07
NDUFA4O00483 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
NDUFA4O00483 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NDUFA4O00483 RPS2P55-201ENST00000397318 883 ntBASIC14.64□□□□□ -0.07
NDUFA4O00483 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFA4O00483 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.64□□□□□ -0.07
NDUFA4O00483 AC107956.1-201ENST00000494359 873 ntBASIC14.64□□□□□ -0.07
NDUFA4O00483 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.64□□□□□ -0.07
NDUFA4O00483 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NDUFA4O00483 CD177P1-201ENST00000606252 935 ntBASIC14.64□□□□□ -0.07
NDUFA4O00483 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.64□□□□□ -0.07
NDUFA4O00483 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NDUFA4O00483 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFA4O00483 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFA4O00483 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.64□□□□□ -0.07
NDUFA4O00483 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFA4O00483 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.64□□□□□ -0.07
NDUFA4O00483 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA4O00483 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 FSCN1P1-201ENST00000568912 1481 ntBASIC14.63□□□□□ -0.07
NDUFA4O00483 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NDUFA4O00483 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFA4O00483 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NDUFA4O00483 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.63□□□□□ -0.07
NDUFA4O00483 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NDUFA4O00483 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFA4O00483 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFA4O00483 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFA4O00483 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFA4O00483 AC233702.5-201ENST00000584107 538 ntBASIC14.63□□□□□ -0.07
NDUFA4O00483 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.63□□□□□ -0.07
NDUFA4O00483 AC011298.2-201ENST00000617989 482 ntBASIC14.63□□□□□ -0.07
NDUFA4O00483 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFA4O00483 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms