Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL354751.1-201ENST00000412768 1863 ntBASIC18.16■□□□□ 0.5
PDLIM1O00151 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM1O00151 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.15■□□□□ 0.5
PDLIM1O00151 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.15■□□□□ 0.5
PDLIM1O00151 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PDLIM1O00151 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.15■□□□□ 0.5
PDLIM1O00151 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.15■□□□□ 0.5
PDLIM1O00151 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.15■□□□□ 0.5
PDLIM1O00151 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PDLIM1O00151 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.15■□□□□ 0.5
PDLIM1O00151 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PDLIM1O00151 FP475955.4-201ENST00000623131 1990 ntBASIC18.15■□□□□ 0.5
PDLIM1O00151 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PDLIM1O00151 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM1O00151 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDLIM1O00151 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.14■□□□□ 0.5
PDLIM1O00151 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDLIM1O00151 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDLIM1O00151 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
PDLIM1O00151 AC141586.3-201ENST00000562166 1838 ntBASIC18.14■□□□□ 0.5
PDLIM1O00151 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM1O00151 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM1O00151 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM1O00151 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM1O00151 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 AL031963.3-201ENST00000606441 850 ntBASIC18.14■□□□□ 0.49
PDLIM1O00151 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM1O00151 AC100791.3-201ENST00000617619 330 ntBASIC18.14■□□□□ 0.49
PDLIM1O00151 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.14■□□□□ 0.49
PDLIM1O00151 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PDLIM1O00151 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.14■□□□□ 0.49
PDLIM1O00151 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.14■□□□□ 0.49
PDLIM1O00151 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM1O00151 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM1O00151 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM1O00151 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.14■□□□□ 0.49
PDLIM1O00151 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PDLIM1O00151 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PDLIM1O00151 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.13■□□□□ 0.49
PDLIM1O00151 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.13■□□□□ 0.49
PDLIM1O00151 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
PDLIM1O00151 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.13■□□□□ 0.49
PDLIM1O00151 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PDLIM1O00151 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
PDLIM1O00151 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.13■□□□□ 0.49
PDLIM1O00151 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.13■□□□□ 0.49
PDLIM1O00151 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PDLIM1O00151 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PDLIM1O00151 AC010980.2-201ENST00000587099 1412 ntBASIC18.13■□□□□ 0.49
PDLIM1O00151 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.13■□□□□ 0.49
PDLIM1O00151 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM1O00151 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PDLIM1O00151 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PDLIM1O00151 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM1O00151 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM1O00151 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.12■□□□□ 0.49
PDLIM1O00151 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM1O00151 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDLIM1O00151 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM1O00151 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms