Protein–RNA interactions for Protein: A6NFT4

CFAP73, Cilia- and flagella-associated protein 73, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP73A6NFT4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 MYCNOS-205ENST00000641950 531 ntBASIC18.83■□□□□ 0.6
CFAP73A6NFT4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CFAP73A6NFT4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.82■□□□□ 0.6
CFAP73A6NFT4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 AC026271.2-201ENST00000428091 497 ntBASIC18.81■□□□□ 0.6
CFAP73A6NFT4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 RARRES2P6-201ENST00000567333 442 ntBASIC18.81■□□□□ 0.6
CFAP73A6NFT4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.81■□□□□ 0.6
CFAP73A6NFT4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP73A6NFT4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP73A6NFT4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP73A6NFT4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP73A6NFT4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.8■□□□□ 0.6
CFAP73A6NFT4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP73A6NFT4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.8■□□□□ 0.6
CFAP73A6NFT4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP73A6NFT4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP73A6NFT4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CFAP73A6NFT4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CFAP73A6NFT4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CFAP73A6NFT4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms