Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
HFM1A2PYH4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
HFM1A2PYH4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC28.25■■■□□ 2.11
HFM1A2PYH4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
HFM1A2PYH4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC28.25■■■□□ 2.11
HFM1A2PYH4 AC009947.2-201ENST00000444014 672 ntBASIC28.25■■■□□ 2.11
HFM1A2PYH4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC28.25■■■□□ 2.11
HFM1A2PYH4 AC022616.7-201ENST00000525383 220 ntBASIC28.25■■■□□ 2.11
HFM1A2PYH4 AL049597.2-201ENST00000565575 961 ntBASIC28.25■■■□□ 2.11
HFM1A2PYH4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
HFM1A2PYH4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
HFM1A2PYH4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
HFM1A2PYH4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
HFM1A2PYH4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC28.24■■■□□ 2.11
HFM1A2PYH4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
HFM1A2PYH4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC28.24■■■□□ 2.11
HFM1A2PYH4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
HFM1A2PYH4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
HFM1A2PYH4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
HFM1A2PYH4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC28.24■■■□□ 2.11
HFM1A2PYH4 BX664615.1-201ENST00000443558 458 ntBASIC28.24■■■□□ 2.11
HFM1A2PYH4 AC063952.2-201ENST00000498792 1227 ntBASIC28.24■■■□□ 2.11
HFM1A2PYH4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
HFM1A2PYH4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
HFM1A2PYH4 NME3-204ENST00000563498 920 ntTSL 2 BASIC28.24■■■□□ 2.11
HFM1A2PYH4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC28.24■■■□□ 2.11
HFM1A2PYH4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC28.24■■■□□ 2.11
HFM1A2PYH4 AL590326.2-201ENST00000625139 305 ntBASIC28.24■■■□□ 2.11
HFM1A2PYH4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
HFM1A2PYH4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
HFM1A2PYH4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
HFM1A2PYH4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HFM1A2PYH4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HFM1A2PYH4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HFM1A2PYH4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HFM1A2PYH4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HFM1A2PYH4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HFM1A2PYH4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC28.23■■■□□ 2.11
HFM1A2PYH4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HFM1A2PYH4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC28.23■■■□□ 2.11
HFM1A2PYH4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HFM1A2PYH4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HFM1A2PYH4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HFM1A2PYH4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
HFM1A2PYH4 AL512353.2-201ENST00000448759 1962 ntBASIC28.22■■■□□ 2.11
HFM1A2PYH4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC28.22■■■□□ 2.11
HFM1A2PYH4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
HFM1A2PYH4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
HFM1A2PYH4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC28.22■■■□□ 2.11
HFM1A2PYH4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC28.22■■■□□ 2.11
HFM1A2PYH4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
HFM1A2PYH4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
HFM1A2PYH4 AC139887.4-201ENST00000607877 719 ntBASIC28.22■■■□□ 2.11
HFM1A2PYH4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
HFM1A2PYH4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
HFM1A2PYH4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
HFM1A2PYH4 KATNBL1P6-202ENST00000562413 1466 ntBASIC28.21■■■□□ 2.11
HFM1A2PYH4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
HFM1A2PYH4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
HFM1A2PYH4 ANKRD20A18P-201ENST00000359341 492 ntBASIC28.21■■■□□ 2.11
HFM1A2PYH4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC28.21■■■□□ 2.11
HFM1A2PYH4 COX11P1-201ENST00000489116 835 ntBASIC28.21■■■□□ 2.11
HFM1A2PYH4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC28.21■■■□□ 2.11
HFM1A2PYH4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
HFM1A2PYH4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
HFM1A2PYH4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
HFM1A2PYH4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC28.21■■■□□ 2.11
HFM1A2PYH4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
HFM1A2PYH4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC28.2■■■□□ 2.11
HFM1A2PYH4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC28.2■■■□□ 2.11
HFM1A2PYH4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
HFM1A2PYH4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
HFM1A2PYH4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
HFM1A2PYH4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
HFM1A2PYH4 FAM8A6P-201ENST00000407496 1135 ntBASIC28.2■■■□□ 2.11
HFM1A2PYH4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC28.2■■■□□ 2.11
HFM1A2PYH4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
HFM1A2PYH4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
HFM1A2PYH4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
HFM1A2PYH4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
HFM1A2PYH4 KRT8P32-201ENST00000512863 1461 ntBASIC28.2■■■□□ 2.1
HFM1A2PYH4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
HFM1A2PYH4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
HFM1A2PYH4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC28.19■■■□□ 2.1
HFM1A2PYH4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC28.19■■■□□ 2.1
HFM1A2PYH4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC28.19■■■□□ 2.1
HFM1A2PYH4 AL441883.1-201ENST00000566170 1045 ntBASIC28.19■■■□□ 2.1
HFM1A2PYH4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC28.19■■■□□ 2.1
HFM1A2PYH4 MIR3180-5-201ENST00000583743 153 ntBASIC28.19■■■□□ 2.1
HFM1A2PYH4 AL023973.1-201ENST00000624619 620 ntBASIC28.19■■■□□ 2.1
HFM1A2PYH4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC28.19■■■□□ 2.1
HFM1A2PYH4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms