Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC010980.2-201ENST00000587099 1412 ntBASIC16.64■□□□□ 0.25
SHISA3A0PJX4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 GPX1P1-201ENST00000388829 606 ntBASIC16.64■□□□□ 0.25
SHISA3A0PJX4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 BID-214ENST00000617586 542 ntTSL 5 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.64■□□□□ 0.25
SHISA3A0PJX4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 AL162741.1-201ENST00000565563 1558 ntBASIC16.64■□□□□ 0.25
SHISA3A0PJX4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.63■□□□□ 0.25
SHISA3A0PJX4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA3A0PJX4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SHISA3A0PJX4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms